Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2225 |
Symbol | |
ID | 4072970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2644188 |
End bp | 2644889 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637984241 |
Product | hypothetical protein |
Protein accession | YP_591300 |
Protein GI | 94969252 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000144782 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.108692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTTCTGA AGTGTGCGGT TGATAGAATT AACGACGTGC GCGCAGCGAA AGCCATCGCC GCCATCAGCC TCGGCCTCTC CGCTCTGTAC CTCGTAGAGT TGCTCGTTTT TTATCGCAAC GATTACCTTG CTTTCCCGTG GGAGGCATCC CCAACTGCTG TCCTCCGTGG GATGCCCTTT CTCCCGCTTG TTGCTCTAGC CGCGGCCGTG GTTGCCCTGT GCGTATGGAA GGCGAATTCA CACGGTCGCG CCAAGAGTCG GACGCCAATC TGGGCGCTGG CGTGGTCAGT TCTGGCGGTG CTTTCGTTGG CGCCGTGCGG TTTTGTTTTC TCGCATCAAG GAGCGGTACA CACCCAGATG AGTGCTGTCG CCTCGGTGCG AACTCTGAGC GTCGCGTTGC GCGAATACGC CAAAGCACAT CCCTCGGAAG GCTATCCGTC GAGTATCTCT CAACTCACTC AGCCGACAGA CGCTCCTTGG CAGATTGATC CCGTTCTCGG TGCAGGGATA AAGAGCGCCT ATCGCTTCGC GTACGCGGCA AACTCAGGGG CTGTCGGCAA GCGCACCCGA TATACGATCA GTGCCGAACC ACTTCATCCA AAAAGTCCGT ACAGCAATCG CTTTTTCTTC ACGGACGAGT CCGGTGTGAT CCGTATGGAG AAGGACAAAA AGGCCACGGC TGACAGCGCG GCGCTGCAAT AG
|
Protein sequence | MVLKCAVDRI NDVRAAKAIA AISLGLSALY LVELLVFYRN DYLAFPWEAS PTAVLRGMPF LPLVALAAAV VALCVWKANS HGRAKSRTPI WALAWSVLAV LSLAPCGFVF SHQGAVHTQM SAVASVRTLS VALREYAKAH PSEGYPSSIS QLTQPTDAPW QIDPVLGAGI KSAYRFAYAA NSGAVGKRTR YTISAEPLHP KSPYSNRFFF TDESGVIRME KDKKATADSA ALQ
|
| |