| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2179 |
|---|
| Symbol | |
|---|
| ID | 4071431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2600271 |
|---|
| End bp | 2601986 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637984195 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_591254 |
|---|
| Protein GI | 94969206 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03436] VWFA-related Acidobacterial domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.306316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGC CCCTTCCCAT CTTCCTTCTT GCAGCTATGC TCCCCTCTGT GCTCGCAAAG
TCTTCCGGCC AGGCAGCCTC AGGCGCTGTC CCGCTCCCTA CGTTCCGCAC ACAGACCGAG
CTCGTCACCG TTCCCGTTGT CGTCACCGAC AAGAGCGGCA AGCACATCAC CGGCCTCAAA
CAATCTGATT TCACCCTTGA AGAGAACGGC TCCCGTCGCG AGATCTCTCA CTTTGAAGAG
ATTTCACCGA CTTCCGAAGC CTACCGTGTT CCCGACAAGG TCGCGCGTGA ATACTCTAAC
TTCATTCCCA CGGATGCCAA CGTCCGCCGC ACCTCGATCA TCGTTATCGA TCTGCTGAAT
ACCCCGTTCC GTCACCAGGC GCAAACGCGC AAAGAGATCA TTTCCTACCT CTCAAAGCAT
GTGGAAGATA ACGGCCCCAC TTCCCTTTGT ATTCTGGATG GCAACGGCTT AAAGCAGATC
CACAGCTTCA CTAGCAATAC TTCCGTCCTG ATCGACGCTC TCAAGCTGGT GAACGGAAAG
CTCTCTTCGC AGGACCTGCA GGCGGCCGGC AACCTGGTGA ACCCCGACAG CCCGCATCCC
TTTGACGACG CCACGGCCGA CATCAATGTC GCCGACACCT CCACACAACT CCTCGAAGTG
ATGGCCGAGC GCGTTGATGC CGACTACGCT GCTTACGATC AGCGCCTCAA CACCCAGAAG
ACTCTCAAAG CACTCGAGCA GATCGGCCAG GCCTACGCCG GAATTCCCGG ACGGAAAGCG
CTCCTTTGGG CGACCGGCGG CTTTCCGTTT TTCCTCAATG ATCCCCGCAG CGTCATCGGC
ATTGATAGTT CGCTGATGCA GAACTACGAG CGCACCTGGC AGATCCTCAA CGCCGCCAAC
ATCGCGCTTT ATCCAATCGA TTCCCAAGGC CTGCTTCCGC CCGACACGTC GCAGCGCGGC
TTCGCGTCGT CCCGCACGTC TGTCGCGTCG CGCGGATCAT CGCTGGCTCC GAATCGTCCG
ACGAGACTGC CCATTGATGC CCGCACCAAC ATCGAAGACT CGCTGCGTAC CTTCGCAGCC
GCCACCGGCG GTCAGGCCTG CCTCAACACC AACGATCTAG CTAACTGCTT CGCGAAGGCC
GCGACCGATT CTTCGCAGTA CTATCTGCTG AGCTATTACC TGTCCCAGAA CGACCGTAAG
CCCGGCTGGC GAAAGTTGAA GGTCCACGTC GCCGTGTCGT CCGTCGAAAT CCGCGCCCGC
GACGGTTTCT TTATCGGCGA TACCAAGCAG CACTCGGAAG GCAGCCTCAA AGAACAACTC
GATACCGCCG CTGTCTCCCC GATTGACTAC ACTTCAATCC CGCTCGCCAT CCAACTCAAG
GAAATCACCA AGGCCGCGAA CGGAGACCAC AACGTTTCCT TCACGTTGCT AGCGCAATCG
GGCGCGCTCA CCATCGACAT CGCCGACAAC AACCACGTTT ACGTTGATAT CGGCGCCGTT
GTCGAAAATG GCAAGGGGCA GCTTGCCCGC GTCCTCGGCC AAACCATTGA CGCCCACATC
AAGCCCGACA ACATCGCGAA GGTCATGAAG GAAGGCGTCA GCTTCACCAG CGACCTCGTC
GTCCCCGCCG GCAAAGCCAC GCTCCTCCGC TTCGTTGTCC GCGACGGCCA GTCCGGCAAA
ATGGGCAGCG TCACCGTGCC AATCCATCTT GAATAA
|
|---|
| Protein sequence | MIRPLPIFLL AAMLPSVLAK SSGQAASGAV PLPTFRTQTE LVTVPVVVTD KSGKHITGLK
QSDFTLEENG SRREISHFEE ISPTSEAYRV PDKVAREYSN FIPTDANVRR TSIIVIDLLN
TPFRHQAQTR KEIISYLSKH VEDNGPTSLC ILDGNGLKQI HSFTSNTSVL IDALKLVNGK
LSSQDLQAAG NLVNPDSPHP FDDATADINV ADTSTQLLEV MAERVDADYA AYDQRLNTQK
TLKALEQIGQ AYAGIPGRKA LLWATGGFPF FLNDPRSVIG IDSSLMQNYE RTWQILNAAN
IALYPIDSQG LLPPDTSQRG FASSRTSVAS RGSSLAPNRP TRLPIDARTN IEDSLRTFAA
ATGGQACLNT NDLANCFAKA ATDSSQYYLL SYYLSQNDRK PGWRKLKVHV AVSSVEIRAR
DGFFIGDTKQ HSEGSLKEQL DTAAVSPIDY TSIPLAIQLK EITKAANGDH NVSFTLLAQS
GALTIDIADN NHVYVDIGAV VENGKGQLAR VLGQTIDAHI KPDNIAKVMK EGVSFTSDLV
VPAGKATLLR FVVRDGQSGK MGSVTVPIHL E
|
|---|
| |