| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2175 |
|---|
| Symbol | |
|---|
| ID | 4073117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2594941 |
|---|
| End bp | 2596806 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637984191 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_591250 |
|---|
| Protein GI | 94969202 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.171043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACC CAGATACCAC TCCCACGCTC GTCGAGCCGA CTACGAATGT GGATGATCCT
GCAGACAACC AACAAGTAGA AGCAACGAAG GAAACTTCGA AGGTCGCACA AAAGCGGAGT
CCCACGAGCA GCGACACGTG GATCGGCTAT GTATTTTGGC TGATCATCAT CTTTTGGATT
CTGGTGGTGA AAGTTCCACC TATGCACGCG TTTTTTTGGC GGTATTGGTG GGAGTCGCTC
ATAACCCTGG TGTTGTTGAT CGCGGTGATT GGATCGTACG CGCCGTGGCG GCAGAAGATT
CGGAGCAGCG TACACACACG GGTTGGCTCG GTGATCGTGG CGCTCGCGGG TATCTCGATT
CTTGAGGGCG CTATCAGCGT TCTTCCACAG CGATACCAGA TCCTGGCGTT GCGCTCCACC
TTCCTGCTGG TGGTGTGCCT GTTTCCGGTG ATCCTGTATT ACCTGTTCAT CACAACGCGA
AAGTACAGCT TACTGAATGA ATTCATCACC AACCTGGAAC GTCTCGGATT GCTGCGCGAA
CGAGTGACGA CTCCGCGTTC GGCTTCATCT GCCGCGAAGG AGATCGCCCC GGACTCAGCG
TTGAATTTGC GTATTCTGAC ATATTTGCAA AAATTCGAGG CGGTTTACGG AAGCCTGGAT
CCAGAACTCG TGAGCGAACT CGTGGCTGCT ACAGACCCAG CGGCGGTGTT TGCGAAGCCG
GAGTGGAACC GACGCGCCAC TGCGGGATTC TCCAGCATCT TTACTCCTGA AACTACGGCT
CCACTGGTTA CAGCTACCGG GCTGATTGCG CTCGGGTGGA TCCTGGCGTT ACCGCCATGG
CAGGCGGCTG CGCCCCAGCC GCTTGCGGCT CAAGCCAAGA GCGCCAACAC GCAGGTGCTT
TCGGCAGCGA CGCCGGGATT GCCGACGAGC GCAACTGGAA GTACGGAGAC TCCGCTGCCC
GCGAAGGCCG CAGATGCCGC GCCGTCGACG GTGGCACAGA CGAACACAGT GTCGTGGCTG
CGGGCTTTGT ATCCGGACGA ATCGCCGGTG TATTTCGCGT TCCTGGGCGC ATATTTCTTC
TCGATTCAAA TGCTGTTCCG CCGATATGTG TTGAAAGACT TGCGCTCGAG CGCCTATGTA
GCAGTGTCGC TGCGGATTGT GATGGCGGTA ATGGGGACGT GGGTGATGAT TCCGACCGCG
CGCACGTTGC ACATCCTGGA TAGCTCCTCA GACCTGAACA CCAATTCCAA GCTGCTGGTG
CTGAGCTTTG TGATCGGAGT GTTTCCGCCG GTGATCTGGC AATTCCTGCA GGCGGCGTTC
AAGAAGATCA GCGGGGCACG ATATTTCTTG CCGAGCTTGA GTTCGGAGTT GCCGCTGAGC
AGCCTTGATG GACTGACCGT GTGGCACGAG GCGAGACTCG AAGAAGAAGA CATTGAGAAT
GTGCCGAACA TGGCAACGGC GAGCATTGTG GACCTGATGC TGTACACGCG CTTTTCGCCG
GACCGGATCA TTGACTGGAT CGACCAGTCG ATTCTTTACA CCCAGCTCGG ACCTGACCGA
AAGATCGGAA ACAGTGAGGT TACGGTGCGG GCGAAGTTGC GGTCACATGG AATCCGCACA
GCAACGGCAT TGCTGGAAGC GTATCGGAAA GCGACAGACC CAGAAGATAA GAGGGGGTTC
GAGGCGATTC TCGAAAGCGA CGGACGGCCA CCCATCCGTA CGCTGACAGA TGCTCTGCTA
ACAAGTCCGA ACCTGGATCT GGTACGAAAC TGGCGCGCTC TGGAGCCATT TGCGGGAGGC
GAGTGGGTGT CGCATACGGC TCCGGTACAC CATAATCGCG CGTTGGCGGT GCAAGCGAGA
GGGTAG
|
|---|
| Protein sequence | MPDPDTTPTL VEPTTNVDDP ADNQQVEATK ETSKVAQKRS PTSSDTWIGY VFWLIIIFWI
LVVKVPPMHA FFWRYWWESL ITLVLLIAVI GSYAPWRQKI RSSVHTRVGS VIVALAGISI
LEGAISVLPQ RYQILALRST FLLVVCLFPV ILYYLFITTR KYSLLNEFIT NLERLGLLRE
RVTTPRSASS AAKEIAPDSA LNLRILTYLQ KFEAVYGSLD PELVSELVAA TDPAAVFAKP
EWNRRATAGF SSIFTPETTA PLVTATGLIA LGWILALPPW QAAAPQPLAA QAKSANTQVL
SAATPGLPTS ATGSTETPLP AKAADAAPST VAQTNTVSWL RALYPDESPV YFAFLGAYFF
SIQMLFRRYV LKDLRSSAYV AVSLRIVMAV MGTWVMIPTA RTLHILDSSS DLNTNSKLLV
LSFVIGVFPP VIWQFLQAAF KKISGARYFL PSLSSELPLS SLDGLTVWHE ARLEEEDIEN
VPNMATASIV DLMLYTRFSP DRIIDWIDQS ILYTQLGPDR KIGNSEVTVR AKLRSHGIRT
ATALLEAYRK ATDPEDKRGF EAILESDGRP PIRTLTDALL TSPNLDLVRN WRALEPFAGG
EWVSHTAPVH HNRALAVQAR G
|
|---|
| |