| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2151 |
|---|
| Symbol | |
|---|
| ID | 4068788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2571617 |
|---|
| End bp | 2573371 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637984167 |
|---|
| Product | pyruvate oxidase |
|---|
| Protein accession | YP_591226 |
|---|
| Protein GI | 94969178 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGC TCGTTGCTGA TCTGCTCATA GAACGTCTGA TCCACTGGGG AGTGGACACA
GTTTTCGGGT TGCCGGGAGA CGGCGTGGAC GGCCTCTTTG AAGCCCTTCG CACTCACCAG
GAGAAGCTTC GCTTCATCCA GGTCCGGCAT GAAGAGGCCG CCGCCTTCGC AGCCTGCGGT
TACGCGAAAT ACACGGGCCG GCTTGGGGTC TGCATCGCAA CTTCAGGTCC GGGCGGCATC
CACCTCTTGA ACGGTCTCTA TGATGCCAAG TGCGACGGGC AGCCGGTGCT TGCAATCACA
GGTCATACCT TCCACGATTT GATCGGCACC TCGTACCAGC AGGACGTGGA TCTCGACAAG
CTGTACATGG ATGTCGCTGC CTACAACCAG CGCATCATGG GACCAGGGCA CGTGGAGAGC
GCGCTTGATG AGGCGGTCCG GACAGCCCTG TCCCGCAGGA CGGTCGCACA TCTCACGATT
CCTAAAGACA TCCAGGAATG GCGTGCCTCG AATTTTCATC GCTCTCCCGC CAACGTGCCC
GACCACAGTG GCGCTATCTT CGAGCCTGCC TATCCACAAC CTCCACAAGA GCTGCTACGG
AGGGCAGCGG ACATTCTGAA TCAAGGCAGA AAGGTCGCAA TCCTCGTTGG CCAGGGATGC
CTCGCGGCGC GAGCAGAGGT TGAACAGGTT GCGGAACTGC TCGCCGCGCC AGTGGCCAAG
GCTTTGCTCG GAAAAGCAGT GCTGCCCGAT CGCAGCCCCT ACACAACCGG TGGCCTTGGT
CTACTGGGCA CGGCGCCTTC GCAGGACGCA ATGGAGGAAT GCGACACTCT GCTGATTGTC
GGAACGTCGT TCCCTTACCT CGAGTTCTAT CCCAAGCCGG GGAAAGCAAA GTGCGTGCAG
ATTGACATTG ATGCCACCCG CATCGGCTTG CGCCACCCTG CAGATGTCGG GCTCGTGGGG
GACTCACGGA CTGCTCTCCG GGCGCTGGTC CCTCTCTTGA AGAGACGAGA GGACCGGTCC
TTCCTCGAGA CAGCGCAGAA GCGGATGGAG AGTTGGAATG AGTTGATGAA AGAGCGCGGC
ACGCGTACTG ACCTGCCGAT GAAGCCGCAA GTCGTCACCC ACACTCTTAA TCAGCTTCTC
AGGGACGATG CCATCGTCTC AACCGACAGC GGCACCATCA CCACCTGGAC GGCGCGCTAC
ATCGAGATGC GCGGAACCAT GCAATTCTCA GTATCAGGAA CGCTAGCAAC AATGGCGAAC
GGTCTCCCCT ATAGTATCGG CGCGTCAGTG GCACACCCCG GCCGCCAGGT GGTCTGCATC
ATCGGCGACG GCGGTTTGAC CATGCTGATG GGCGAACCCG CGACGCTGGT GAAATACAAA
CTCCCCGTGA AGATCGTCGT GATCAAGAAC AACGTGCTCG GACAAATCAA GTGGGAGCAG
ATGGTGCTTG ATGCCAATCC ACAATTCGGA GTTGAGTTGC AGCCCATTGA CTTTGCGAAG
GTTGCCGAAG CCTGCGGGGT GGCTGGATTC AAACTCGAAA ATCCCGCAGA CGCAGAGAGG
GTCCTCCGCT CAGCGCTCGA GCATGATGGA CCGGCCCTTG TTGAAGCAAC GGTGGACGCC
AACGAGCCGC CACTGCCCGG CAACGTGAGT CTGAAGCAGG CCCTACATTT CGCGGAAGCC
CTGGCGAGCG GCCAGAAGGA CGCCGCGGAG ATCATCAAGA CTGTGGTCGA GAACAAAGTG
CGCGAGGTGA TCTGA
|
|---|
| Protein sequence | MAKLVADLLI ERLIHWGVDT VFGLPGDGVD GLFEALRTHQ EKLRFIQVRH EEAAAFAACG
YAKYTGRLGV CIATSGPGGI HLLNGLYDAK CDGQPVLAIT GHTFHDLIGT SYQQDVDLDK
LYMDVAAYNQ RIMGPGHVES ALDEAVRTAL SRRTVAHLTI PKDIQEWRAS NFHRSPANVP
DHSGAIFEPA YPQPPQELLR RAADILNQGR KVAILVGQGC LAARAEVEQV AELLAAPVAK
ALLGKAVLPD RSPYTTGGLG LLGTAPSQDA MEECDTLLIV GTSFPYLEFY PKPGKAKCVQ
IDIDATRIGL RHPADVGLVG DSRTALRALV PLLKRREDRS FLETAQKRME SWNELMKERG
TRTDLPMKPQ VVTHTLNQLL RDDAIVSTDS GTITTWTARY IEMRGTMQFS VSGTLATMAN
GLPYSIGASV AHPGRQVVCI IGDGGLTMLM GEPATLVKYK LPVKIVVIKN NVLGQIKWEQ
MVLDANPQFG VELQPIDFAK VAEACGVAGF KLENPADAER VLRSALEHDG PALVEATVDA
NEPPLPGNVS LKQALHFAEA LASGQKDAAE IIKTVVENKV REVI
|
|---|
| |