Gene Acid345_2136 details

Gene Information

• Locus tag: Acid345_2136
• ID: 4072378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: -
• Start bp: 2552116
• End bp: 2555490
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637984151
• Product: TonB-dependent receptor
• Protein accession: YP_591211
• Protein GI: 94969163

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0917219
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCCATT GGCGGCTTCG CCTGGGCGCG TTGTTACTTG GTTGCTTGTG TGCGGGAAGT 
CTGTTCGCCC AGGAGATTAC GGGCGACATC CGCGGAATTG TGAAAGATGC TTCGGGCGCA 
CTCGTCGCCG GAGCCACCGT TGAGGTAACC AACACTGATC GCAACACGAC AATTCGTACC 
GTCACGACCG ATACCAACGG CAATTACGTT GCCGCTTACC TACCCGTCGG TCATTACAAG 
GTCTCGGTCA AGAAGGAAGG CTTCAAGGCA GCTGAGACCA ACAATGTGGT CTTGAACGTG 
CATGATCGCC TTACGGTGGA TGAAACGCTC CAGGTCGGCT CTAGCGGCCA GACCGTAACG 
GTCAACGAGA ATCCCAGCCA GGTGAATCTC GACAACGCGA CTGCCCAAGG CGTGATCACC 
GGCAACCAGG TGCGGCAGCT CACACTCGTC ACGCGTAATT ACGAGCAGTT GGTTGCAGCC 
CTTCCCGGCG TTTCGACGAA CCTCGCTTCC GATCAGCTGT TCGTCGGCGT AAGCAATCCG 
GTCGGCACCT CAAACCAGAT CAACTTTTCG ATTAATGGCA CCCGTCCAAC GCAGAACAAC 
TGGCAGATCG ACGGTTCCGA CAACGTGGAC CGCGGCGCCA ACCTGACGCT GCTCGCCTAT 
CCGAGCGTGG ATTCGATCCA GGAGTTCAAC GTCCTGCGCT CGAACTACAT GCCGGAACAA 
GGACGCAGCT CAGGCGGACA GGTCAACGTC ATCACGCGTT CCGGCACCAG CGCCTTCCAC 
GGCAGCGCGT ACGAGTTCTT CCGAAACGAT GTGCTGAACG CCAACAACTT CTTCAATAAT 
CGTGCCGACG TTGAACGCCC CGCGATGCGT TGGAACGACT TTGGCTTCAC CATCGGCGGA 
CCGATCTACA TTCCCGGCCA CTACAACACG GAAAAGAACA AGACGTTCTT CTTCTATTCG 
CAAGAGTGGC GAAAGATCAT CACCTACAAC ACGTTCACCA GCGGCGTGCT GCCCACGTCG 
GCAAACCTCG GAGGCGATTT CGGAAGCACG ATTTGCGTCG CTTTGAATCC CGATGGGACG 
TGCGCAGCGT TGGGCAATCA TGTCTCCACG ATTAGTCCCA CGGCGCAGGC ATACATCAAC 
GACATCTATT CAAAGTTCCC AGCGCCCAAC AATGCTGACG GAACGCTCAC CTGGGTAGGA 
CGCAACCAGT TCAACTATCG CGAAGAGAAC GTTCGCGTTG ACCACAATTT CTCGTCCAAG 
TTCAGCATCT TCGGACGCTA CCTCGACGAC CAGATCCCAA CGCAGGAGCC TGGCGGTCTG 
TTTACCGGTC TCGCCGTTCC TGGCGTTGCT GTGACCAACA CGAATGCTCC CGGACGCAAC 
GCCTCGATTC ACGCGACGAT TGCGTTCTCG CCCACGACGC TGGCGGACAT GGGCTATGCG 
TACTCGTATG GCGCGGTCAT CAGTTCGCCG GCGGGAACCA TGGCCTCAGC GAATTCGCCG 
GATGTGAATC CGACGCTTCC CTTCGGACTC GGTCCGCTGC TTCCGGGCAT CGGATTCTTC 
AATTCCACGC AGGGGCTCGC CGGATTCGGT CCATACAACG ACTACAACTA CAACCACAAC 
GCGTTCGCTA CGTTGACGAA GGTGATTGGA AAGCACTCGC TGAAATTCGG CGGGACCTTC 
AACTACTACA CCAAGGACGA GAACGTGAAT GGCTACGGGC TGCAATCGGG CTCCTACACG 
TTCGCGGATT GCGTGGATAG CAGTGCTACC GTCACCAGCC CGTATCCCTG CTCCGACACC 
GGCAGCACCG ATCAGGAGTG GGCGAACTTC CTCAACGGCA ACGTGTCGTC GTTCAACCAG 
ACAAACATTG ACTTCCGCGC GCTGGTACAT CAGCACCAGT GGGAATTCTT TGGTCAGGAT 
GAGTGGCGTC TCACACCGTA CTTCACACTC AGCTACGGCG TGCGCTACTC GCTCTTCCAG 
GCGCCCACCT ACGGCAACGG CCTGCTTACG ACCTTCGATC CGTCGAAGTT CGATTCCACC 
AACACGCCCG CGATCGACAG CAACGGTCTT TACGCGGCCG TGCCATCTGC GCCGTATACC 
AATGGCATCC TGATCGGCGG CAAGGATTCT CCGTATGGCG ATGCCGTGAA CCGCACGCCG 
AAACTCAACT TCGCGCCGCG CTTAGGGTTT GCATGGGACC CGACGCATAC CGGCACGACT 
TCTATCCGCG GCGGATTCGG ACTGTTCTTC GATTCACCTG CCGTGAACAG CATGGAACAG 
TTCCAGCCGG GAAATCCGCC GTTCGTTACT TCGACCTCAA TTTCGAACAC CAATTTCGAC 
AATCCGGGTT CAGTACAGGC GGCGCCAAAC CTGTCACCTC CCGACATTGG CGGCATCGCT 
CCTAACTGGA AGCAGCCGTA CACGATGATG TGGAGCCTGG ACGTGCAGCA CCAGTTCACG 
CCGTCCACCA TCTTCGACAT TGGCTACTAC GGCAACGCGG GACGCCATCT TATTGGCGTT 
GTAGACGTAA ACCAAGCGCC ACTCGGCGGC TTCCAAGCCC TCGGCATTCC GGGGCCGGTC 
AGTTCCGGTG ACACGCAGAA GCTCAATCAG ATCCGTCCGT ACCAGGGCTA TGCGTCAATC 
GACTTGTTCT CGCCGGTATT TACGTCGAGC TACAACGGCC TGCAGACGTC GTTCACCAAG 
CACTTCACCG AGAATTCGAT GATCGTGCTG AACTACACCT GGTCGCACGC TCTGGGCACA 
GCTTCGAGCG ACTACCGTGC GCCGCAGTAT TCCATGGATA TTGGCGCGGA ATACGGCAAC 
CTCGACTACG ACCGTCGCAA CATGTTCACC GCCAACTATG TGTACGACCT GCCGTTCTTC 
AAGCACCAGC AGGGGGTTGC GGGACACGTG CTCGGCGGTT GGGAAGTCTC CGGATTGTTC 
TATGCGTATA GCGGGGCGCA CTACACCGCG AGCGCATCGC GCGATCCCGG CGGCCTCGGC 
TTGCGTGATC CGAACACCTT CGAGGGCGGG CGCCCCGACC TCATTGGCAA CCCTCAGCAG 
GGCGCACCGA ACCATCTCGA CAAGTGGTTC AATACCTCAG CGTTTGCGCT CGTGCCAGCC 
GGCGACGTCC GTGTGGGTAA CGAGCCGCGC GGCGTCATCG TGGGGCCGGG CTACTTCCGT 
TGGGATGCTT CGCTGTTCAA GAACATCAAG TTCACCGAAC GCTTGAACTT GCAGTTCCGT 
GCGGAAGCTT TCAACGTGCT CAACCACACG AACTTCAACG CTCCCAACGT CAGTGCGACG 
AGCTCGCTCT TCGGACAGAT ACTGTCCGCA CGCGATCCTC GGCAGCTACA GCTTGCCCTG 
AAGTTGACCT TCTAA 

 

Protein sequence

MSHWRLRLGA LLLGCLCAGS LFAQEITGDI RGIVKDASGA LVAGATVEVT NTDRNTTIRT 
VTTDTNGNYV AAYLPVGHYK VSVKKEGFKA AETNNVVLNV HDRLTVDETL QVGSSGQTVT 
VNENPSQVNL DNATAQGVIT GNQVRQLTLV TRNYEQLVAA LPGVSTNLAS DQLFVGVSNP 
VGTSNQINFS INGTRPTQNN WQIDGSDNVD RGANLTLLAY PSVDSIQEFN VLRSNYMPEQ 
GRSSGGQVNV ITRSGTSAFH GSAYEFFRND VLNANNFFNN RADVERPAMR WNDFGFTIGG 
PIYIPGHYNT EKNKTFFFYS QEWRKIITYN TFTSGVLPTS ANLGGDFGST ICVALNPDGT 
CAALGNHVST ISPTAQAYIN DIYSKFPAPN NADGTLTWVG RNQFNYREEN VRVDHNFSSK 
FSIFGRYLDD QIPTQEPGGL FTGLAVPGVA VTNTNAPGRN ASIHATIAFS PTTLADMGYA 
YSYGAVISSP AGTMASANSP DVNPTLPFGL GPLLPGIGFF NSTQGLAGFG PYNDYNYNHN 
AFATLTKVIG KHSLKFGGTF NYYTKDENVN GYGLQSGSYT FADCVDSSAT VTSPYPCSDT 
GSTDQEWANF LNGNVSSFNQ TNIDFRALVH QHQWEFFGQD EWRLTPYFTL SYGVRYSLFQ 
APTYGNGLLT TFDPSKFDST NTPAIDSNGL YAAVPSAPYT NGILIGGKDS PYGDAVNRTP 
KLNFAPRLGF AWDPTHTGTT SIRGGFGLFF DSPAVNSMEQ FQPGNPPFVT STSISNTNFD 
NPGSVQAAPN LSPPDIGGIA PNWKQPYTMM WSLDVQHQFT PSTIFDIGYY GNAGRHLIGV 
VDVNQAPLGG FQALGIPGPV SSGDTQKLNQ IRPYQGYASI DLFSPVFTSS YNGLQTSFTK 
HFTENSMIVL NYTWSHALGT ASSDYRAPQY SMDIGAEYGN LDYDRRNMFT ANYVYDLPFF 
KHQQGVAGHV LGGWEVSGLF YAYSGAHYTA SASRDPGGLG LRDPNTFEGG RPDLIGNPQQ 
GAPNHLDKWF NTSAFALVPA GDVRVGNEPR GVIVGPGYFR WDASLFKNIK FTERLNLQFR 
AEAFNVLNHT NFNAPNVSAT SSLFGQILSA RDPRQLQLAL KLTF