Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2121 |
Symbol | |
ID | 4069547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2536443 |
End bp | 2536919 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637984136 |
Product | alkylhydroperoxidase AhpD |
Protein accession | YP_591196 |
Protein GI | 94969148 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.930524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCC GCCTTCCCTA CGACTCTTAC GCCAAAGATG CCCTGCGACT GATGTACCAG AGTGAGGCCT ACCTTAAGCA CCATAGCGGC CTGGAGGCGT CGTTAATGGA ACTCGTAAAA ATGCGTGCTT CGCAGATGAA TGGCTGCGCT TTCTGCCTCG ACATGCATAG CAAAGACGCC CGCGCCGCCG GCGAAACCGA GCAGCGCCTT TATGGACTGA ATGCCTGGCG TGAAGCTCCG TATTACACGG ACCGCGAACG CGCGGCGCTC GCCTGGACCG AGGCCGTCAC CAATGTCCAG CAGGGACACG TCCCCGACTC CGTCTTCGAA GAAACGCGCA AGTTCTTTTC GGAAGAGGAG CTCGTCAACC TTACTTATGC AATCAACCAA ATCAATTCCT GGAACCGTTT CGCTATCGCT TTCCGCGCTG AAGCCGGAAC CTACCAACCG GCCCAACTCC AAAAAGCTGT GCCGTAA
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Protein sequence | MKSRLPYDSY AKDALRLMYQ SEAYLKHHSG LEASLMELVK MRASQMNGCA FCLDMHSKDA RAAGETEQRL YGLNAWREAP YYTDRERAAL AWTEAVTNVQ QGHVPDSVFE ETRKFFSEEE LVNLTYAINQ INSWNRFAIA FRAEAGTYQP AQLQKAVP
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