| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2082 |
|---|
| Symbol | |
|---|
| ID | 4069933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2496279 |
|---|
| End bp | 2497139 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637984097 |
|---|
| Product | undecaprenyl-diphosphatase |
|---|
| Protein accession | YP_591157 |
|---|
| Protein GI | 94969109 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0924847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0215547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCAT ACCTGCTCGC CGCCCTGCTC GGCGTCGTCG AAGGCCTGAC CGAATTCCTG
CCTGTCAGTT CCACCGCTCA CCTGCGCATC TGCGAGGCCC TGCTCCACAT TGATCTCGGC
GACGGCTTCT GGAAGATGTT CTCCATCGTC ATCCAACTTG GCGCCATCCT GTGCCTGCCG
ATTTACTTCC GTGCCCGCAT CAGTGAATTC TTCGCGACAT TTCCGAAGGG CAAATCCGGC
AACCACACCG CGCTCACGCA TCCCCTGACG CTCACCATCA TCGCCTTCCT CTGCACCGCC
ATCCCCGCCT TCCTCTTCAC CAAGATCATC GGCAAGCACC TTGAGAGCGT GATCATCATG
GGCTCCGCGC TGCTCATCGG TGGCATCGTG ATGTGGATTG TGGACGTAAT GTTCGCCGAC
AAGGGTGCCA CCGACGATAT GGACAAGATG TCCGTTGGCC AGGCCATCTG GATCGGCCTC
TGCCAGGTCC TCTCCGCCGT ATTCCCCGGT ACCTCGCGCT CCATGTCCAC GATTGCTGCC
GGGCAACTCT CCGGGATGAC CCGCGCCGCC GCCCTCGAGT TCTCGTTCTT CCTGTCGATT
CCCACTATGG TCGTCGCGAC CTGCTACGAC CTGCTCAAGA CCCTTCGTCA CAAGGACGAA
GCGGGTGCTG CGCTCGGCGT CGTTCACATG GATGCGCATG CCTGGATCAC ACTCGCGATC
GGCTTCATCG TGAGCTTCAT CGTCGCCTAT TTTGTGGTCG CCTGGTTCAT GAAATGGGTG
CGCACGCGCG GCTTTGTGCC CTTCGCTGTG TATCGGATTG TCGTTGGGAT TGCGGTACTG
GCGTGGGCTC TAAAGAGGTA G
|
|---|
| Protein sequence | MNAYLLAALL GVVEGLTEFL PVSSTAHLRI CEALLHIDLG DGFWKMFSIV IQLGAILCLP
IYFRARISEF FATFPKGKSG NHTALTHPLT LTIIAFLCTA IPAFLFTKII GKHLESVIIM
GSALLIGGIV MWIVDVMFAD KGATDDMDKM SVGQAIWIGL CQVLSAVFPG TSRSMSTIAA
GQLSGMTRAA ALEFSFFLSI PTMVVATCYD LLKTLRHKDE AGAALGVVHM DAHAWITLAI
GFIVSFIVAY FVVAWFMKWV RTRGFVPFAV YRIVVGIAVL AWALKR
|
|---|
| |