| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2047 |
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| Symbol | |
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| ID | 4070589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2449397 |
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| End bp | 2452045 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637984061 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_591122 |
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| Protein GI | 94969074 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGAG CGATTTGGGA GGGCGTGAGG AACGTGGTTC GTCCGCGGGC GGCGCAGAGG
GATGCGCAGC AGGAGATCGA TGCGTTCTAT GAAGCGGCGA TCGCCGATAA AAAAGCGCGC
GGCATGACCG AGAACGAGGC GCGGCGGCAG GTGAGACTGG AAAATGGCAG CGCAGACCTT
GTGCGCGATG CAGTGTTTGA GTCGCGATGG GAAGACCGCG TGGAGAGCGT GCGGAGGGAC
GTCGCGTTCG CAGGGCGAAT ATTGGCGCGC AATTTTGGGC TGTCGGTAAT TGCGGTGGTT
ACGCTGGCGC TGGCGATTGG CTCGACAACG GCGGTGTACA GCGTTGTAGA GGGTGTGCTG
CTGCGGCCGT TTCCGTTCAC ACAGCAGGAC CGGTTGCTGA TGGTATGGCA GAAGGGTGAG
GACGGAAAGA ATTCGAATGT CGGGTTCGCG ACGTTCGATG ACTGGCGCAA GCTGAACCAT
TCGTTTTCGT ATATGGGAGC GGTGTCGTTC TGGACGCCGA CGCTGGTCTC GGACGCGGGA
GCGGAGAATT TATCGGGCTT CCGGGTGAGC GCGGGAATGT TCGACATGCT CGGCGTGCGG
ATGCGTGTGG GGCGCGACTT CACGAAAGAG GAGGACATTC GCGGGCAAGG GACGTCGGTG
ATCCTTGGCT ACGCGTTGTG GCAGAGCCGG TTTGGTGGGG ACCCGGCGGT GGTTGGCAAA
TCGGTGCAAT TGGGGTCGAA GGTGTACACC GTGGTGGGAG TGTTGCCGGA GAACATGCCG
TCGGTATTCT CGTTCGATCC GCGAAAGGAA GCGGACATCT ATTCACCGCT GGCGTACGAC
ACGTCGCTCG AGTACGCGTG CCGGACGTGC CAACATCTGC GCGTGCTGGG AAGGCTGCGA
GACGGTGTGA CCGAGAAGCA GGCACTTGCG GAGATGGACC AGATTTCGAA GAGCCTGGTG
CAGCAGTATC CGACGGAGTA CGCGGCCTCG GGCGTGTTGT TCACGGAATT GCACGAGTAC
GTGGTGGGCA ATGTGCGACC GGTGTTGCTG TTGTTGTTCG GTGCGGTGGC ACTGGTGTTG
TTGATTGCGT GCGTGAATGT TTCGAATTTA CTGCTGAGCC TGGCGCTGAA GCGGCGGCGG
GAATTTGCGC TGCGGGCGTC TCTGGGAGCG GGGTCGAGGC GACTGGTTCG GCAGATGCTA
ACGGAGGCGC TGTCGCTGGC GTGCGTCGGA AGCGCACTGG GATTCGGACT GGCGTGGGCA
ATTTTGCGTG CGGTGCTGAA GGCGGGTGGG ACATCGTTGC CGCGGATGCA TGATGTGCAT
CTCGATGCGG GGGTGTTGGC ATTCACCATA TTCGTTTGCG TTGCGAGCGC GTTGATCTTT
GGATTGTTGC CGGCATTTCA CGCGCGCAAG GCCGATCCGG TAGATGCGTT GAATGAAGGT
ACGCGGGCGA CGACATCGGG TGGGCGACTG CGATTGAAGA ATGCGCTGGT GGCGTCGAAC
GTGGCGATTT CGTTGGTGCT GCTGATTGCA GCCGGATTGA TGACGAAGAG TTTCGTGCGG
CTGACGCGGG TGAATCCGGG GCTGTCGTCG AAGGGCGTGC TGACGGTTAG AGTGTCGTTG
TGGGGGCAGA AATACCAGAA GGACCCGGCG GTGGTGAGTT TCTACGATGA GGTGCTGCGG
AGGATCAGCG CGGTGCCGGG CGTGGAGTCG GTGGGGCTGA CGAGCCAGTT GCCACTAGGC
GGAAACCTGG ACCGTTACGG CGTACATGCG GTGGACAAAC CGAGAGCGAA CCCGGAGAAC
GACCCGAGTG CGGATCGGTA TTCGATATCG CCGGAGTATT TCCGCGCTCT GCTGATTCCG
CTGCTGCAAG GACGGGAGTT CACGAACGAG GACGATCGCA CGGAGAGTCA GAAGGTGATG
GTGATCAGCG AAACGTTCGC GAAGACGGTG TGGCCAGGGG AAGATCCCAT CGGCAAGCAA
TTGCGAGTCG GCGGGATGGA TTCGCCGATC AGGACCGTGG TCGGAGTGGT GGGAGATGTG
TTGCACAAGG GACTCGACGC GGAGCACACG ATGCAGATGT ACATCCCGCA TTCGCAGTTC
ACGGACAGCG ACGTGGTGCT GGTGGTGCGA GCGAAGGGCG TAGAGCCGGC GGCAATCGGC
GGCGACGTGA GACGAGCCAT CACGGCGGTG GATGCGCAGC AGCCGATCGG CGCGGAGATG
ACGATGGCTG AGGTGGTGCG GGCGTCAGTG GCGAGACAGA GATTTTCCGC GCTGCTGTTT
GCGGCGTTTG CGTTGTGCGG TGCGTTGATG GCGGCAGTGG GAATTTACGG TGTGGTGTCA
TACGCAGTGG TGCAGAGGAC GCAGGAGATT GGGATACGTA TTGCGATGGG GGCCCCTGCA
GGCAGCGTGT TTGCGTTGAT CCTGAAGAAG GGAATGCAGC CGGCGTTGCT CGGACTGATG
GCGGGCTTGC CGGCGGCGTT TGCGATCAGC CAACTGCTGG CGTCGTTGCT GTTCAAGGTG
AAGGCGAACG ACGCGGTGAC GTATGCGGCG ATGACGATCG CGGTGATTGC CGTGGCATTG
TTGGCGTGCA TCGTGCCAGC TCGACGCGCG ACTCACGTGA ATGCGGTGAC GGCGATCCGA
ACAGAGTAG
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| Protein sequence | MLRAIWEGVR NVVRPRAAQR DAQQEIDAFY EAAIADKKAR GMTENEARRQ VRLENGSADL
VRDAVFESRW EDRVESVRRD VAFAGRILAR NFGLSVIAVV TLALAIGSTT AVYSVVEGVL
LRPFPFTQQD RLLMVWQKGE DGKNSNVGFA TFDDWRKLNH SFSYMGAVSF WTPTLVSDAG
AENLSGFRVS AGMFDMLGVR MRVGRDFTKE EDIRGQGTSV ILGYALWQSR FGGDPAVVGK
SVQLGSKVYT VVGVLPENMP SVFSFDPRKE ADIYSPLAYD TSLEYACRTC QHLRVLGRLR
DGVTEKQALA EMDQISKSLV QQYPTEYAAS GVLFTELHEY VVGNVRPVLL LLFGAVALVL
LIACVNVSNL LLSLALKRRR EFALRASLGA GSRRLVRQML TEALSLACVG SALGFGLAWA
ILRAVLKAGG TSLPRMHDVH LDAGVLAFTI FVCVASALIF GLLPAFHARK ADPVDALNEG
TRATTSGGRL RLKNALVASN VAISLVLLIA AGLMTKSFVR LTRVNPGLSS KGVLTVRVSL
WGQKYQKDPA VVSFYDEVLR RISAVPGVES VGLTSQLPLG GNLDRYGVHA VDKPRANPEN
DPSADRYSIS PEYFRALLIP LLQGREFTNE DDRTESQKVM VISETFAKTV WPGEDPIGKQ
LRVGGMDSPI RTVVGVVGDV LHKGLDAEHT MQMYIPHSQF TDSDVVLVVR AKGVEPAAIG
GDVRRAITAV DAQQPIGAEM TMAEVVRASV ARQRFSALLF AAFALCGALM AAVGIYGVVS
YAVVQRTQEI GIRIAMGAPA GSVFALILKK GMQPALLGLM AGLPAAFAIS QLLASLLFKV
KANDAVTYAA MTIAVIAVAL LACIVPARRA THVNAVTAIR TE
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