| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2016 |
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| Symbol | |
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| ID | 4070345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2414440 |
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| End bp | 2415954 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637984030 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_591091 |
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| Protein GI | 94969043 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTGC CCATTGGGCG TGAGAAAAAG ATAGTCAAAC GATTGCCGAT CGTGACTGTC
ATCCTGATTC TCACTAACAT TCTCGCTTTC TGCCTGACGA TCCGCGACAT CGATGACGAT
ACAGGCAACC GGAACCTCAA CACGGTCCGC AACCACTTGC TGGTCATGAA GGCGCGGTTC
CCGGACGTCG TGTTGGATAC CGAAGCGCAG CAGATGGTGG ACGACTTCCG GAAGACTCGA
CCCGAAGCCT GGCAGATGGT TGCGGACCCG AACCGCGAGC CGATGGACAC ATGGGAAGCC
GTACTAGTCG ATGAAGAGAA CCCGAAAATC GAGAAGCTCC AGGAGCAGGT AAACCTGCTC
TGCATCGAGT TTCGCGACCT TCAAAACCGA GACAACTCCG TCCTCTGGAT GTACGCATTC
CACTCCTATC ATCCTAAGTA CCGGAGTTAC ATCAGCCATC AGTTCCTGCA CGGAGGGTTC
TTTCACCTCC TCGGCAACAT GTGGATGTTG TGGCTGTGCG GCGTTGTCCT GGAAGAAGTC
TGGGGACCCT ACGTGGTGCT GGGCTTCTAC CTCTGTGCCG GAGTATTCGC AGCCGCGGCG
CATGGCGCCA TGAACCCGAA TTCGCTCATA CCGATGCTTG GAGCCTCGGG ATCGGTGGCC
GGCCTCATGG GCGGCATGCT GGTGCGCTAC CCGAAGCTCA AAGTAAAGAT GTTGTTCTGG
CTGTTCTTCT ACTGGCGAAC ATTTTTCGCG CCGGTTTACA TCCTTGCGCC GCTGTGGTTT
GTTGCCGAAC TGTTCTGGGG CGGGCTCGGT GAGCGCGGCA TTGCCCACTG GGCACACGTT
GGGGGCTTCG CATTTGGAGC GGTCGTGGCG CTGGCCTTCG ATTTCGGCCG CGTCGAGAAG
ATTACGAACC CGGAAGAACC TGTGCCGGTA GTCTGGAAGC CCGACACCGA GTTCCTGCAT
GCGGCGCAGT TGCTGGAAAA ACGCGAGACG AATACTGCGC TCGCCATTCT CCGAAACTAC
GTGAAGAAGA ATTCGAATGT GATCGACGCA TGGGAATTGT TGCAGCAGGC GCAGATTCAG
AAGAACGATG CAAACGAGCA GCGTCAAGAA ACACTTCCGG TCCTGATTCG TCTTTATCTC
GGGGTTGGAA ACGACGAACG GGCGCTTTTG CACCTGCGCG AGTTCCGCAG GCTCGGAGGA
ACGATCCTTC CAGCTTCAAC GTGGCTTGAA CTCGCACGAA GCTACGAACG GGTGGAACAG
TGGGAAATCG CCGCCCGCGA ATTCGAGAAC CTTGGCATTT CGTATTACGC CACGGACCGA
ACATCGCTGA CGGCGCTGCT GAGCGCAGCC AGAATCTATC TCACGAAGCT CGATCGCCCG
GCCGATGCAA ACCGCCTTTA TCAGGCGGCC GGCAACTCGC CGATACCACA CTTGGAAATG
GATGCGGTGA TCAAGCATGG GATCAGCCAG TCCGCCGCTG CGAATACCGC AAAGAGCAAT
GGTGTAGCGT TCTAG
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| Protein sequence | MLLPIGREKK IVKRLPIVTV ILILTNILAF CLTIRDIDDD TGNRNLNTVR NHLLVMKARF
PDVVLDTEAQ QMVDDFRKTR PEAWQMVADP NREPMDTWEA VLVDEENPKI EKLQEQVNLL
CIEFRDLQNR DNSVLWMYAF HSYHPKYRSY ISHQFLHGGF FHLLGNMWML WLCGVVLEEV
WGPYVVLGFY LCAGVFAAAA HGAMNPNSLI PMLGASGSVA GLMGGMLVRY PKLKVKMLFW
LFFYWRTFFA PVYILAPLWF VAELFWGGLG ERGIAHWAHV GGFAFGAVVA LAFDFGRVEK
ITNPEEPVPV VWKPDTEFLH AAQLLEKRET NTALAILRNY VKKNSNVIDA WELLQQAQIQ
KNDANEQRQE TLPVLIRLYL GVGNDERALL HLREFRRLGG TILPASTWLE LARSYERVEQ
WEIAAREFEN LGISYYATDR TSLTALLSAA RIYLTKLDRP ADANRLYQAA GNSPIPHLEM
DAVIKHGISQ SAAANTAKSN GVAF
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