| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2002 |
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| Symbol | |
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| ID | 4070908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2398731 |
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| End bp | 2399924 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637984016 |
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| Product | hypothetical protein |
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| Protein accession | YP_591077 |
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| Protein GI | 94969029 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00963424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGC GCGGCGCAAA AGGTTTCACG TTGGTCGAAC TGCTGGTGGC AATCAGCCTT
GGATTGCTGG TTACCGGTGC AGCAGTCGCT GTCTACAAAC AGGCAGTAGA CAGTACGACC
TACCTCACGC AGCGAACTGT CGTCCAAGGC AATGCTCGGG CTGCGATGAA TACGATCTCG
CAGGACCTGA ACTTTGCCGG GTATGGGCTA CCAATCGGCG GAATTCCAGT GCCGACGGCC
GCGCTCTTTA GCTGCGCTAC TGGAAGCGCC GCCGCGTCCT GGGCATATAG CTGCCCGACG
ACTGCGCCAT CGTTCCCGGT TATCTCGGGC GCCGCGACCA TGTCCGGCAT CACGCCGATG
TATCAGGCCG GCCCGACGAT CAACGGAAAC GCAACTGACC AGATGGCAAT GGCTTATGTT
GACAGCTCTC CAAATTTTTC CAACAACACT TGCGGGGTTT CTACGCAATG TGGGTTTGAC
GCATTCCCAT TGACGCAGGC GTCGGTGTCT GGCAGTACAA CGACGCTTTA CTTCAACGGT
TCGACTACTC CGGCGCCAAA CGATACCAAG TGGGGTTTGA AGGTTGGGGA CATCCTGCTG
GTCTCGAACT CCACCGGCCA GGCCGTAGGA GAAGTCACGA GCGTAACCTC GGGCAATGTT
GTGCTCGCTG CAAGTGATCC GATGAAGTTG AATCAGGCGT TCGGGACAGG CGGATCGGTG
CCCAATGTCC TCGGATTCAG TTCAGGTATC CAAGCTTACA ACAACGGAGC AGGCCCCCTG
CAGTCAACAA ACGTGAAGCG TCTGTACATC GTGACTTACT ACGTAGCCAC AGATCCTTTG
GCGCAGGCGG TGGGAACAAC TGGAAATCCG ACGCGCCTGT ACCGGATGGT GAACGGCGAT
TCCAATACCA ATCCCCCGGT TCCAGTGGCA GAACAGATTT CCAATCTGAC CTTCAGCTAC
AACATGTTCG ATTCTGTCTG TGGCGGTTCA CAGTCCGCCA ACCAACGCAA TCCGACAACG
AACCAAATCG GCTTGATCAA GACGATCAAT GCCAGCATTT TTGCGGCGAG CACACTCAAC
ACGACAGCTA TTCCCGGCCA GGCCATCCAG CAGATTCCGA TGACCACCAC AGTTTCGCCA
AGGAACCTCA GTTATTTCGA CTCGTATTCT TCGACGCCGC AAGGCAGTTG CTAA
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| Protein sequence | MKMRGAKGFT LVELLVAISL GLLVTGAAVA VYKQAVDSTT YLTQRTVVQG NARAAMNTIS
QDLNFAGYGL PIGGIPVPTA ALFSCATGSA AASWAYSCPT TAPSFPVISG AATMSGITPM
YQAGPTINGN ATDQMAMAYV DSSPNFSNNT CGVSTQCGFD AFPLTQASVS GSTTTLYFNG
STTPAPNDTK WGLKVGDILL VSNSTGQAVG EVTSVTSGNV VLAASDPMKL NQAFGTGGSV
PNVLGFSSGI QAYNNGAGPL QSTNVKRLYI VTYYVATDPL AQAVGTTGNP TRLYRMVNGD
SNTNPPVPVA EQISNLTFSY NMFDSVCGGS QSANQRNPTT NQIGLIKTIN ASIFAASTLN
TTAIPGQAIQ QIPMTTTVSP RNLSYFDSYS STPQGSC
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