| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1997 |
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| Symbol | |
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| ID | 4070903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2393808 |
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| End bp | 2396102 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637984011 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_591072 |
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| Protein GI | 94969024 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGC TCAAAGGGGT AGCAGCGCTG CTATTTGTGG TTGTCCTGGC AGCACTCCCC
GTCATTGGCG ACAAGGCTCC TTCTTTATAC GACAAAGGGA AGGACGCTGA GGCGCGGCAA
GACTACGAGG CGGCGTACGA GTACTACAAC GAGGCCTACA AACTTCATCC GAAGGACGTT
CGCCTGCGGG CCAACGCGGA ACGCGCTAAG TTCCTGGCGG CTTCTTCGCA CGTACACCGC
GGGCAGATTC TTCGCGACGC CGGAAAAATG CAGGATGCAC TCGCCGAGTT CCAGAAGGCA
GCCGCCATTG ATCCGTCGAG CTTTATTGCC GTGCAGGAAG TGCGGCGAAC GCAGCAGATG
ATCGAGGAGG CGGAGCATCC CGCGCCGCAA TCGCTCAATA CCGGGGACGT CCTCACAAAT
CGCATTCAGC AGGCTGCTGG GCCAGTGGAC CTGGCGCCGA TCTCGAATGT TCCGATTACT
CTGCGCCTGT CGGAAGACTC CAAGATCGTT TACGAGTCGA TCTGCAAACT CGCTGGCATC
AACGTCCTTT TCGATCCCGA TTACACGTCG CGTCGCGTCA CGATCCAGTT GAATGGCGTG
ACGCTACAGG ATGCGCTCGG TATTGTTGCA TTGGAATCGA AGACATTTTG GCGGCCCATT
ACCCCGAACA CAATTTTCAT CGCGGCTGAT ACTCCGGCGA AGCGGAAGGA ATTAGAGCAG
AACGTAGTCC GCACTTTTTA TCTTTCCAAT CTTTCGCAGC CGACGGAGTT ACAGGACCTG
GTGAACACGA TCCGTACGAT CGTGGAAGTG AATCGCGTGC AGCAGTTGCC GACGCAGGGC
GCGATCGTGG TGCGCGGCAC TCCCGACCAG GTCGCCCTGG TTCAGAAGCT GATTGACGAT
ATTGATAAGG CGCGGCCGGA AGTTGTTGTG GAAGTGGCGG TGATGCAGGT TTCGAAGACC
AAGATGCGGA ACCTTGGCAT CCAGCCACCG TCCAGTATTT CGGTGTCGAT GGCCTCAAAC
CTAAGCAGTA ACAACAATAA CAATAACAAC AACAATAACA ATAACGGCAA CGGAAACGGA
AACGGCACGG GAACTGGTAC CGACAACAGT AACGGCGGGA TCAGCCTCAA CGATCTCGCC
CACCTCAATG CCACGAATTT TATTCTCACC GTTCCGACGG CAACGGCGAA TTTCCTCTTT
AGTGATGCCG ATACGAAGCT CATTCAGAAT CCGAGCATTC GCGCGGTGGA CGGACAGAAG
GCGACGCTGA AGATCGGCGA TCGAATTCCG GTGGCGACTG GTTCATTCCA GCCTGGCATC
GGCGGTGTGG GTATCAACCC GCTGGTGAAC ACGCAGTTCA ACTACATTGA CGTGGGCGTC
AACATCGACA TCACGCCGCG CATTCACGCC AATAATGAAG TCTCGATGAA GCTGGTCCTC
GATGTCTCAT CGGTTACGGG ATACCAGAAC ATCGGCGGCA TTCAACAGCC GACAATTGGA
CAGCGCAAGA TCGAGCACGA GATTCGCCTG AAGGATGGCG AGATCAACCT GCTGGGCGGC
ATCCTCCAGA GTGAAGACGA TAAAACGATT GCTGGATTGC CCTACCTCTC ACAGATTCCA
CTGTTGCGCT ACTTCTTCAG CACGGACAAC AAGACGAAGA GCGATTCCGA AGTAGTGTTC
GTGGTGATTC CGCACATCGT GCGTGGCTAC GACGTGAATC GGTCCAATAC GCGGGCTGTG
GATGTGGGAA CAGGTTCCGC GATCCAATTG ACCCGGATTC CGGTGCAGCC GGCTGCCGCG
GCGCCTGCGC AGAGCCAACC AGCCGGGCAG CCGCACGGAG TGCCGCAGTC GAAGAATGAT
CCTGCACAGG GAGCGCCGAA TGGCGCGGTG CTGAGCTTCG ACCCCGCGAC GGTGGATGTT
CCGGTCGGCT CGACAGTAGC TGTGAATGTC GCAATCGCCG GAGGACAGAA CGTGTATTCG
GTTCCAGTGC AGATTGGGTA CGATCCGAAG ACGCTGTCGC TGGTGAATGT TTCCAACGGC
AATTTCCTCA GTCGCGATGG GCAGGTGGTG GCGCTAGTAC ACCGTGACGA TCCGATTACG
GGCCAGGTAC AGGTGACGGC GACGAGACCA CCGGGCGCCG CCGGAGTGTC CGGGGAAGGG
CAGGTGTTCA CGCTGACCTT TATGGCGAAG GCTCCCGGGG CGTCGCAATT GAGTATTCAC
CAGGCGGTTT TGCGGGATAC AGCGCAACAA AAGATTCCGG CGACCGGTTC GCAGGCAATG
ATTACCGTGC ACTAA
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| Protein sequence | MKRLKGVAAL LFVVVLAALP VIGDKAPSLY DKGKDAEARQ DYEAAYEYYN EAYKLHPKDV
RLRANAERAK FLAASSHVHR GQILRDAGKM QDALAEFQKA AAIDPSSFIA VQEVRRTQQM
IEEAEHPAPQ SLNTGDVLTN RIQQAAGPVD LAPISNVPIT LRLSEDSKIV YESICKLAGI
NVLFDPDYTS RRVTIQLNGV TLQDALGIVA LESKTFWRPI TPNTIFIAAD TPAKRKELEQ
NVVRTFYLSN LSQPTELQDL VNTIRTIVEV NRVQQLPTQG AIVVRGTPDQ VALVQKLIDD
IDKARPEVVV EVAVMQVSKT KMRNLGIQPP SSISVSMASN LSSNNNNNNN NNNNNGNGNG
NGTGTGTDNS NGGISLNDLA HLNATNFILT VPTATANFLF SDADTKLIQN PSIRAVDGQK
ATLKIGDRIP VATGSFQPGI GGVGINPLVN TQFNYIDVGV NIDITPRIHA NNEVSMKLVL
DVSSVTGYQN IGGIQQPTIG QRKIEHEIRL KDGEINLLGG ILQSEDDKTI AGLPYLSQIP
LLRYFFSTDN KTKSDSEVVF VVIPHIVRGY DVNRSNTRAV DVGTGSAIQL TRIPVQPAAA
APAQSQPAGQ PHGVPQSKND PAQGAPNGAV LSFDPATVDV PVGSTVAVNV AIAGGQNVYS
VPVQIGYDPK TLSLVNVSNG NFLSRDGQVV ALVHRDDPIT GQVQVTATRP PGAAGVSGEG
QVFTLTFMAK APGASQLSIH QAVLRDTAQQ KIPATGSQAM ITVH
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