| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1995 |
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| Symbol | |
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| ID | 4070901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2390402 |
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| End bp | 2392849 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637984009 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_591070 |
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| Protein GI | 94969022 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0984059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTG AACCAAAAGT AGCCACGGTT GAGTTTACCG GCGGCAAGTC CTTAAGTTTT
GAAACCGGAA AATTAGCGAA GCAGGCACAT GGATCGGCGA TTGTCCGGAG CGGACAAAGT
GTGGTGCTCG CTACTGCCTG CGCCAATGCC GACCCGCGCG AGGGAATCGA CTTTTTCCCG
CTGACCGTGG ACTACCGCGA ATACACCTAT GCCGGCGGAC GTTTCCCCGG CGGCTTTATC
AAGCGCGAAG GCCGGCCGAG CGAAAAAGAA ATCCTCACCA GCCGCCAGAT TGATCGCCCC
ATCCGCCCAC TGTTCCCTGA AGGCTTCCGT TGTGAAACCC AAGTTATCGC CATGGTGCTG
TCTGCGGATT CGGAGAACGA TCCGGACGTG TGCGGCATCA ACGGCGCGTC GGCGGCACTG
GCTGTGTCGG ACATCCCGTT CAACGGACCG ATCGGCGCCG TGCGTGTGGG ACTGATCGAA
GGGCAGAACA TTGTGAATCC GACGTACGAC GAAATGCGTG CGTCGAAGCT GAACATCATG
GTCGTCGGCA CCGCCGAAGG CATCGTGATG ATCGAATCTG GTGCGCACGA GGCGACAGAA
GAAGAAGTCG TCAGCGCGAT TGAATTCGGG CATGGCGAGA TCAAGAAAAT CTGTGCGGTG
ATCAGCAAGC TGGCGAAGGA AGTCGGCAAG ACGAAGCGCA CAGTGGCTCC GGTCGAACTC
GACCAGCCCT ACCTGGATGG TTTGCGCAAG AAGATCGGTG CGGACCTGGC GGATGCGCTC
AACACGGAGA AGTATCCGAA GAGCGAGAGC TACGCCAAGG TGAAGGAAAT CAAGTCGAAG
CTGAAGGAAG AGATTCCGGC AGACGACGAT GCTGCGCTGA AGAAGCTCGG CAAGTATTAC
GAGCTGCTGC GCGAAGACAT CTTCCGCCAG CAGGTAACGA AAGAAAAGCG GCGTCCGGAT
GGGCGTGCGT TCGACCAGAT CCGGCAGATT TGGATTGAAG TGGATGTTCT GCCACGTACG
CACGGGTCGG CGGTCTTCAC CCGCGGCGAG ACGCAGGCAC TGGTTACGAC CACGCTGGGC
ACTGGCGATG ACATGCAGCG CATGGAAGGT TTCGAAGGCG AAGCCAAGAA GCGCTTCATG
TTGCATTACA ACTTCCCGCC GTTCTCGGTG GGTGAAGTGG CCTTCCTGCG CGGCGCAGGC
CGTCGTGAGA TCGGTCACGG AGCATTGGCA GAGCGCGCGT TGAGCGCCGT TCTTCCGAGT
GAAGACAAGT GGCCTTACGC GATGCGTGTG GTTTCCGACA TTCTCGAGTC CAACGGTTCG
TCGTCGATGG CTTCCATCTG CGGCGGTTCG CTGAGCTTGA TGGATGCGGG CGTTCCGTTG
AAGGCTCCGG TTGCGGGTAT CGCAATGGGC CTGGTGAAGG AAGGCGATGA TTACGCCATC
CTGACCGACA TCGCTGGCGC CGAAGACCAC TACGGCGATA TGGATTTCAA GGTCGCCGGC
ACGACGCAGG GCATTACCGC TCTGCAAATG GATATCAAGA TCGGCGGCAT TACGGCGCAG
ATCATGCGCG AGGCGCTTGA GCAGGCCCGT CGCGGACGTC TCTTCATTCT CGACAAGATG
AATGAAGTGA TCCAGTCTCC GCGTACTGAA CTGAGCGAGT TCGCACCGCG CTTCTACACG
TTGCAAATTC CGACCGATAA GATTCGCGAC CTGATTGGGC CGGGTGGCAA GGTCATCCGC
GGGATCGTGG AAGCGACCGG CGTGAAGATC GATGTCGAGG ACAGCGGCAA GGTGAACGTG
GCGTCGAGCG ATCAGGAAGC AGCCAAGAAG GCGCTCAAGA TGATCGGCGA CATTACCGCC
ACGGCCGAAG TAGGGAAGAC CTACCTCGGA ACCGTGACGC GGCTCGCAGA CTTCGGAGCG
TTCGTCGAGA TCCTGCCGGG TACCGATGGC CTACTGCACA TCAGCGAAGT CGCTGAGCAT
CGCATTAAGG ATGTAAAGGA CGAGCTGCAC GAGGGCGATC AGGTCCTGGT GAAAGTTCTC
GCAGTGGACG GCAATCGCAT TAAGCTGTCG CGCAAGGCGG TGCTGAAAGA GCAGCGCGCG
AAGATGGCAA CAGAAGGCGG TGGCGACGGT GGTCCGGCTC CCGAGGTGGA GCACAGTGAG
CACGGCGCAC CGGGCGGCGT GACCTTCGAA GGCGGTTATG AAGGCGGCGA CGAACCTGAA
GTCGAAGAGG GCGAGCCGAA CTTCAATCGC GATGACGCAC CAGGTAGCCA CGGCGCAACG
CAACCGCACA GCGGCGGAGA TCGTCCTGAT CGTGGACCGC GTCCGCATGG TGGTGGAGGC
GGCGCCGGTC GTGGTGGTCG TGGACGGCGT CCGGGTGGTG GTGGCGGCGG TGGACGTGGT
GGTCACGGCG GTCGCGGCGG CGGTGGTGGT GGAAGAGGCC GCGGTTAG
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| Protein sequence | MKPEPKVATV EFTGGKSLSF ETGKLAKQAH GSAIVRSGQS VVLATACANA DPREGIDFFP
LTVDYREYTY AGGRFPGGFI KREGRPSEKE ILTSRQIDRP IRPLFPEGFR CETQVIAMVL
SADSENDPDV CGINGASAAL AVSDIPFNGP IGAVRVGLIE GQNIVNPTYD EMRASKLNIM
VVGTAEGIVM IESGAHEATE EEVVSAIEFG HGEIKKICAV ISKLAKEVGK TKRTVAPVEL
DQPYLDGLRK KIGADLADAL NTEKYPKSES YAKVKEIKSK LKEEIPADDD AALKKLGKYY
ELLREDIFRQ QVTKEKRRPD GRAFDQIRQI WIEVDVLPRT HGSAVFTRGE TQALVTTTLG
TGDDMQRMEG FEGEAKKRFM LHYNFPPFSV GEVAFLRGAG RREIGHGALA ERALSAVLPS
EDKWPYAMRV VSDILESNGS SSMASICGGS LSLMDAGVPL KAPVAGIAMG LVKEGDDYAI
LTDIAGAEDH YGDMDFKVAG TTQGITALQM DIKIGGITAQ IMREALEQAR RGRLFILDKM
NEVIQSPRTE LSEFAPRFYT LQIPTDKIRD LIGPGGKVIR GIVEATGVKI DVEDSGKVNV
ASSDQEAAKK ALKMIGDITA TAEVGKTYLG TVTRLADFGA FVEILPGTDG LLHISEVAEH
RIKDVKDELH EGDQVLVKVL AVDGNRIKLS RKAVLKEQRA KMATEGGGDG GPAPEVEHSE
HGAPGGVTFE GGYEGGDEPE VEEGEPNFNR DDAPGSHGAT QPHSGGDRPD RGPRPHGGGG
GAGRGGRGRR PGGGGGGGRG GHGGRGGGGG GRGRG
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