Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1993 |
Symbol | |
ID | 4070899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2389076 |
End bp | 2389858 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637984007 |
Product | exodeoxyribonuclease III (xth) |
Protein accession | YP_591068 |
Protein GI | 94969020 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0563751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTATG ATGCCAACGT GCTTATCGCT TCCTGGAACG TGAACTCCAT CCGCGCCCGC CTCGGCATCG TGAGCGACTG GATCGCCAAG AACCATCCCG ACGTCCTGCT CATGCAGGAA CTCAAAGCCA CCGAGTTCCC TGCCGAAGCC TTTCATGCGC TCGGCTACCA GGCCGCCGCC GTCACCCAGA AGGCCTACAA CGGTGTCGCC GTGCTCTCGC GCCTGCCGGT CGAAACCGTG CGCACCGCCC TGCGTGGCGA CGAAGCCGAT AGCCACGCCC GCTATCTCGA AACCCGCATT GACGGCCTGC GCGTGGTCAA CATCTACGCG CCGAACGGCA ATCCCATCGG CACCGAGAAG TTCAGCTACA AGCTCGCGTG GTTAGATCGC TTAATCCAGG AAATGCAAAG CTGGCTCAAA GACGACATCC CGACGGTCGT TGCCGGCGAC TACAACATCA TTCCGGAAGA TATCGACTGC CACAAACCAT CCTCGTGGAT TCGCGATGCC CTCTTCCAGC CCGAGCCTCG CGAACGCTAT CGCGCTCTCC TCGCCATGGG CTACACCGAC GCCTTCCGCA CGCTGCATCC CGGGGAAACC GGTCAGTTCA CCTTCTGGGA TTACTTCCGC AAAGCCTTCG AAACCAACCG CGGTATCCGC ATCGACCACT TCCTGCTCTC ACCGTCACTG AAACCTCGCC TGGCGAAGTG CCACATCGAC ACTGAACCCC GCAAACTTGA AAAGCCGTCC GATCACACCC CAATTGTTCT AGAGCTCCAT TGA
|
Protein sequence | MSYDANVLIA SWNVNSIRAR LGIVSDWIAK NHPDVLLMQE LKATEFPAEA FHALGYQAAA VTQKAYNGVA VLSRLPVETV RTALRGDEAD SHARYLETRI DGLRVVNIYA PNGNPIGTEK FSYKLAWLDR LIQEMQSWLK DDIPTVVAGD YNIIPEDIDC HKPSSWIRDA LFQPEPRERY RALLAMGYTD AFRTLHPGET GQFTFWDYFR KAFETNRGIR IDHFLLSPSL KPRLAKCHID TEPRKLEKPS DHTPIVLELH
|
| |