Gene Acid345_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1993 
Symbol 
ID4070899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2389076 
End bp2389858 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content60% 
IMG OID637984007 
Productexodeoxyribonuclease III (xth) 
Protein accessionYP_591068 
Protein GI94969020 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0563751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTATG ATGCCAACGT GCTTATCGCT TCCTGGAACG TGAACTCCAT CCGCGCCCGC 
CTCGGCATCG TGAGCGACTG GATCGCCAAG AACCATCCCG ACGTCCTGCT CATGCAGGAA
CTCAAAGCCA CCGAGTTCCC TGCCGAAGCC TTTCATGCGC TCGGCTACCA GGCCGCCGCC
GTCACCCAGA AGGCCTACAA CGGTGTCGCC GTGCTCTCGC GCCTGCCGGT CGAAACCGTG
CGCACCGCCC TGCGTGGCGA CGAAGCCGAT AGCCACGCCC GCTATCTCGA AACCCGCATT
GACGGCCTGC GCGTGGTCAA CATCTACGCG CCGAACGGCA ATCCCATCGG CACCGAGAAG
TTCAGCTACA AGCTCGCGTG GTTAGATCGC TTAATCCAGG AAATGCAAAG CTGGCTCAAA
GACGACATCC CGACGGTCGT TGCCGGCGAC TACAACATCA TTCCGGAAGA TATCGACTGC
CACAAACCAT CCTCGTGGAT TCGCGATGCC CTCTTCCAGC CCGAGCCTCG CGAACGCTAT
CGCGCTCTCC TCGCCATGGG CTACACCGAC GCCTTCCGCA CGCTGCATCC CGGGGAAACC
GGTCAGTTCA CCTTCTGGGA TTACTTCCGC AAAGCCTTCG AAACCAACCG CGGTATCCGC
ATCGACCACT TCCTGCTCTC ACCGTCACTG AAACCTCGCC TGGCGAAGTG CCACATCGAC
ACTGAACCCC GCAAACTTGA AAAGCCGTCC GATCACACCC CAATTGTTCT AGAGCTCCAT
TGA
 
Protein sequence
MSYDANVLIA SWNVNSIRAR LGIVSDWIAK NHPDVLLMQE LKATEFPAEA FHALGYQAAA 
VTQKAYNGVA VLSRLPVETV RTALRGDEAD SHARYLETRI DGLRVVNIYA PNGNPIGTEK
FSYKLAWLDR LIQEMQSWLK DDIPTVVAGD YNIIPEDIDC HKPSSWIRDA LFQPEPRERY
RALLAMGYTD AFRTLHPGET GQFTFWDYFR KAFETNRGIR IDHFLLSPSL KPRLAKCHID
TEPRKLEKPS DHTPIVLELH