| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1973 |
|---|
| Symbol | recR |
|---|
| ID | 4069359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2364841 |
|---|
| End bp | 2365440 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637983986 |
|---|
| Product | recombination protein RecR |
|---|
| Protein accession | YP_591048 |
|---|
| Protein GI | 94969000 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00615] recombination protein RecR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.181253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCAAGT TTGCCGAGCC GATGGCGCGG TTGATTGACG AATTGAAGAA GCTGCCGGGC
GTCGGCAATA AGTCGGCGCA GCGCCTGGCG TTTCATATCC TGCGCTCCAG CAACGACGAC
GCCGAACTGC TGGCGGATGC CGTCCGCGAC GTGAAGGCCA AACTCCGGCT CTGTTCCATC
TGCAACAACA TCACCGATGT CGACCCCTGC ACCTACTGCG CGAACCCCAC GCGGAACCAG
CAGGTCATCT GCGTAGTGGA AGAACCGACC AATATTTCTG CCGTCGAAAA GACCCGCCAT
TTCAATGGCG TATACCATGT TCTTCATGGA GCACTTTCAC CTTTGCACGG GGTAGGTCCG
GAGCATTTGC GGATCAGCAA CCTGATCAAA CGGGTGGAGG GCGGCAAGGC AGAAGAGGTC
ATTCTCGCGA CCAATCCGAC GGTCGAGGGT GAGGCGACGG CGACGTATCT GTCGAAGATC
CTCAAGGCTG AGGGCGTACG GGTGACGCGG ATCGCGACCG GCGTCCCCGT CGGCAGCGAC
ATAGAGTACG CCGACGAAGT GACCATGCAG AAGGCGATGG AAGGACGACG GGAGCTTTAG
|
|---|
| Protein sequence | MSKFAEPMAR LIDELKKLPG VGNKSAQRLA FHILRSSNDD AELLADAVRD VKAKLRLCSI
CNNITDVDPC TYCANPTRNQ QVICVVEEPT NISAVEKTRH FNGVYHVLHG ALSPLHGVGP
EHLRISNLIK RVEGGKAEEV ILATNPTVEG EATATYLSKI LKAEGVRVTR IATGVPVGSD
IEYADEVTMQ KAMEGRREL
|
|---|
| |