Gene Acid345_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1959 
Symbol 
ID4073219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2352714 
End bp2353349 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content58% 
IMG OID637983971 
Producthypothetical protein 
Protein accessionYP_591034 
Protein GI94968986 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.822135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCACA ACCTGATCGC CGTTCTGGGC GAGTTCATCA TTCATGTCAT CAGCAGTACC 
GGATATCTCG GCGTCATGCT GCTGATGGCG ATCGAGTCTG CCTGCATTCC GCTGCCGTCT
GAAGTCATCA TGCCGTTCTC GGGATACCTG GTGTATACCG GGCGCTTCCA GTTGCTTTGG
GTGGCGACTG CCGGGGCGAT CGGGTGCAAC GTCGGATCGG TGATCGCCTA CGAGATTGGT
TATGTCGGTG GGCGTCCGCT GGTGAACCGC TGGGGACGCT TTATCCTGCT CAACCATCAT
GACCTTGATC GTGCGGAGCA ATTCTTCAAG CGCTTCGGCG ACATCACCGT TTTGGTGGCG
CGCCTGTTGC CAGTGGTGCG GACGTTCATC GCTCTTCCGG CGGGCATTGC GAAGATGCCG
CGGCTGCGGT TTCACGTCTA TACGTTCGTT GGGTCGTGGC CGTGGTGCTT CTTGCTTGCG
TATGTCGGAA TGAAGCTGGG TGAGAGGTGG GAGACGGATC CGCGGTTAAA GATGTGGCTG
CACCGGTTTG ATGCCATCAT CGTTGCTGCC CTTGTGATCG TCATTCTCTT GTTCGTGCGG
TCGCACTGGA AGAACCGGGT GAAAGCGGAA GCGTAG
 
Protein sequence
MLHNLIAVLG EFIIHVISST GYLGVMLLMA IESACIPLPS EVIMPFSGYL VYTGRFQLLW 
VATAGAIGCN VGSVIAYEIG YVGGRPLVNR WGRFILLNHH DLDRAEQFFK RFGDITVLVA
RLLPVVRTFI ALPAGIAKMP RLRFHVYTFV GSWPWCFLLA YVGMKLGERW ETDPRLKMWL
HRFDAIIVAA LVIVILLFVR SHWKNRVKAE A