| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1951 |
|---|
| Symbol | |
|---|
| ID | 4071427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2344680 |
|---|
| End bp | 2345606 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637983963 |
|---|
| Product | malate dehydrogenase (NAD) |
|---|
| Protein accession | YP_591026 |
|---|
| Protein GI | 94968978 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.800681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCATA AAGTTACGGT AGTGGGATCG GGCAATGTGG GCGCCACGGC GGCGCACTGG
ATCGCCTCGA AGGAATTGGC CGACGTTGTG CTGATTGACA TCATCGAGGG CGTGCCGCAG
GGCAAGGGCC TCGACCTGCT GGAAGCGATG CCGATCGAGA AGTGCGATTC GCATGTCCTG
GGCACCAATG ATTACGCCGA CACCGCGAAT TCGGACATCG TGGTGATCAC TGCTGGTATT
CCGCGCAAGC CGGGCATGAG CCGCGATGAC TTGCTCAACA CGAATTACAA GATCATGAAG
GACGTGGTCG GCAAGGTGCT TCAGTACTCG CCGAATTGCA TCCTGATCGT CGTTTCGAAC
CCGCTGGACG CGATGGCACA GACCGCGTTC AAGCTCTCCG GCTTCTCGCG CAATCGCGTG
ATCGGCATGG CAGGCGTCCT CGATAGCGCC CGCTTCCGCA CGTTCATCGC GGAAGAGCTG
AAGGTCTCGG TGGAGAACGT GACGGCTTTC GTACTCGGCG GCCACGGCGA CACCATGGTT
CCTCTGGCGC GGTACTCGAC CGTCGCGGGC ATTCCGATCA CCGAACTGAT CGAGCCCACG
CGCCTGGAGC AGTTGATCCA GCGTACCCGC GATGGCGGCG CCGAGATCGT GAAGTATCTG
AAGACCGGCA GCGCATTCTA TGCGCCTTCG GCGGCTGCGA CGGAGATGGT GGAAGCGATC
CTGAAGGACA AGAAGAAAAT CCTGCCCTGC GCTGCGTATC TCGAAGGCGA GTACGGCATC
AACGGACTGT ACGTCGGCGT GCCATGCAAG CTGGGATCGA AAGGCATTGA GCAGATCGTG
GAGATCAAGC TGACTGCCGA CGAGCAGGCT GCGTTGCAGA AGAGCGCAGA CTCAGTGAAG
GAACTGGTCG GCGTCATCGG CGTTTAG
|
|---|
| Protein sequence | MRHKVTVVGS GNVGATAAHW IASKELADVV LIDIIEGVPQ GKGLDLLEAM PIEKCDSHVL
GTNDYADTAN SDIVVITAGI PRKPGMSRDD LLNTNYKIMK DVVGKVLQYS PNCILIVVSN
PLDAMAQTAF KLSGFSRNRV IGMAGVLDSA RFRTFIAEEL KVSVENVTAF VLGGHGDTMV
PLARYSTVAG IPITELIEPT RLEQLIQRTR DGGAEIVKYL KTGSAFYAPS AAATEMVEAI
LKDKKKILPC AAYLEGEYGI NGLYVGVPCK LGSKGIEQIV EIKLTADEQA ALQKSADSVK
ELVGVIGV
|
|---|
| |