| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1944 |
|---|
| Symbol | |
|---|
| ID | 4071420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2338027 |
|---|
| End bp | 2338584 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637983956 |
|---|
| Product | pyruvoyl-dependent arginine decarboxylase |
|---|
| Protein accession | YP_591019 |
|---|
| Protein GI | 94968971 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1945] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00286] arginine decarboxylase, pyruvoyl-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.550989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCAAAG ACATGGTTCC CAAACGGATT TTCCTCACCA AGGGTGTAGG GAAACATAAG
GAGCGGCTCA CCAGCTTTGA GCTCGCATTG CGTGACGCCG GCATCGCGGC GCAAAACCTC
GTTCGGGTAT CGTCGATCTT TCCGCCCAAC TGCAAATTGA TCTCGCGCAA GGAAGGCCTG
AAGTATCTCA GCCCCGGCGA GGTCGTTTTT GCCGTTGTGG CCGAGAACTC CACTCGCGAG
CCGCACCGCC TTGTCGCTTC GAGCATCGGC CTGGCGCAAC CGGCAGATCA CAGCACCTAC
GGCTATCTCA GCGAACACCA CTCTTTTGGC GAAACCGACG ACATCGCCGG CGACTACGCT
GAGGAACTTG CCGCCGAAAT GCTCGCCACC ACGCTGGATG TCGAGTTCGA CCCCGACAAG
AGCTGGGACG AGAAGAAGGA AGTCTATCGT CTCTCGAACA AGATCGTGCG CACCATGAAC
ACCACGCAAT CGGCGGTTGG CGACAAGAAG GCCTTGTGGA CCACCACGAT CGCAGCTGCG
ATTCTGATTT TCGAATAG
|
|---|
| Protein sequence | MGKDMVPKRI FLTKGVGKHK ERLTSFELAL RDAGIAAQNL VRVSSIFPPN CKLISRKEGL
KYLSPGEVVF AVVAENSTRE PHRLVASSIG LAQPADHSTY GYLSEHHSFG ETDDIAGDYA
EELAAEMLAT TLDVEFDPDK SWDEKKEVYR LSNKIVRTMN TTQSAVGDKK ALWTTTIAAA
ILIFE
|
|---|
| |