Gene Acid345_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1922 
Symbol 
ID4071033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2312780 
End bp2313229 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID637983934 
ProductDoxX 
Protein accessionYP_590997 
Protein GI94968949 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.439341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA AATTACTTGC TACTTCCGAC GATTCCGTAC TCACAGCCCT TCGGCTCGTC 
CTCGGCATCG TGATGTTCGC GCACGGCGCT CAAAAAGTGC TGGGCTGGTT CGGCGGTTAT
GGATATTCCG GCACCATGCA ATTCTTTACG GGCACGCTGC ATATTCCAGC GCCGCTGGGT
ATCCTTTCCA TGGTGGCGGA ATTCGCCGGC AGCTTGGGCT TAATCGTCGG GTTGCTCGGA
CGCGTCGCCG CGTTGGGCAT ACTTGTGAAC ATGGTAGTAG CCGTTTTGAA AGCTCATGCA
CCGAACGGGT TCTTCATGAA CTGGGCCGGA AATCAGAAAG GCGAGGGATT CGAATTTCAC
CTACTGGCCA TCGTGATCGC GCTGGCGATC CTGGTCCGCG GTTCCGGCGC GTTCTCGATC
GACCGGTGGA TCACACGCGA CCGTGTGTGA
 
Protein sequence
MIRKLLATSD DSVLTALRLV LGIVMFAHGA QKVLGWFGGY GYSGTMQFFT GTLHIPAPLG 
ILSMVAEFAG SLGLIVGLLG RVAALGILVN MVVAVLKAHA PNGFFMNWAG NQKGEGFEFH
LLAIVIALAI LVRGSGAFSI DRWITRDRV