Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1912 |
Symbol | |
ID | 4069390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2298014 |
End bp | 2298499 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637983923 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_590987 |
Protein GI | 94968939 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.518038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.581509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACC CCAGCCGTCT CCCCGTTGCC GTGCTTCTCG ACAACGTGCG CAGCATGTAC AACGTTGGCG CATTTTTTCG CGCCGCCGAC GGCGTCAACC TGCAAAAGCT CTGTCTCTGT GGAATCACAG CGCATCCGCC GAAAAAAGCG ATCTCAAAAA CCGCTCTGGG CGCGGAAGAA ACTGTCCCGT GGGAGCACGG TTGGGACGCT GTTGAAATGG CAAAGCATCT TCGCGCGGAA GGATTTCAGC TCGCCGCCAT CGAAACCAAT CCCGAAGCGA CTGATCTCTT CGACTGGCAG CCGCGCTTCC CTGTTTGTGT TGTCTTCGGT CACGAAGTCG GCGGTCTTCT GCCCGAACTT CTCGCCCTCG CCGACGTGCA CATGCGCATC CCCATGCGCG GCGAGAAGAC TTCGCTCAAC GTCGCTACCG CCGGCGGCGT CGTGCTCTAC GAACTCCTCC GGAAATACCA GGCGCTCCAA CCCTAA
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Protein sequence | MSDPSRLPVA VLLDNVRSMY NVGAFFRAAD GVNLQKLCLC GITAHPPKKA ISKTALGAEE TVPWEHGWDA VEMAKHLRAE GFQLAAIETN PEATDLFDWQ PRFPVCVVFG HEVGGLLPEL LALADVHMRI PMRGEKTSLN VATAGGVVLY ELLRKYQALQ P
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