Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1910 |
Symbol | |
ID | 4069388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2295324 |
End bp | 2297267 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983921 |
Product | hypothetical protein |
Protein accession | YP_590985 |
Protein GI | 94968937 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.154238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.259383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGAACA TGAGGAACAA TACGATTGTC CTCCTCGCGT CATGGGTCGT CTGGTGTGCG ATTGCGTTGG TGATGGCGAT GCCAGCAGGC GCGCAGGAAC GAGAGACGGT ACGGGACCGA GACGACAAGC TGAAAGGGAC GGTATCGGAA TCGCAACTCG ATGCCGCGTT ACAGCGTGGA TTGCCGGGAA GAGTGATGAC TCCTATGCCG GCGAATGCCA AAGCCACAGT TGAGAAGAGC GGGGGACTGC GGGGAGCGCC CGCGCGAAGC GTGGAGATGG CGGACATCCC GCAGAAAACG ACGACGAGTT CGATTCCGGG ACTTGCCGAT GGCGGGCGGC CATTGTCGGG ACTAACGGAA GATGAGTACC AGGCGTTGAA GCGGCTGGTT GCGATGCGGG CAGCGCGCGG CGAAGTCGGT ACCAAACCGT CAACCCTGGC GTTGCGGGGC GGCGTGAAGG CAATAGTGCG GCCGGTGCAA ATGACGCAGA TAACGCCCAA TGCCGCGACC GCTCATGCCA GCTTCTTTTA TGGGCAGAAA GAAAATGGAC TGGATCCGCC GGACATGGGC CTGGCGACGA GTGAAAACTT CGTCGTACAG GTGGTGAATG CATCCATTGC CGTGTACGCC AAGAACGGCG TGCTGCAGGC GGGATTCCCA AAGGATGCGG ACACATTCTT CGGGGTGGCG GCGGGCACGT TCATCTTCGA TCCGCGAGCG TTCTACGACT GGGCGAACCA TCGGTTCTTC GTGCTGATGG ACACCTTTAC CAGTGGCACG GCTGGCGGCA GCCTTTACTT TGCGATCAGC AAAACCCAGG ATCCGCGCGG GGGATGGTGG ATTTACCATT TCACGCCTGC CGGTCTCGGC GCCGGAATTT GCGGTGACTT CCCAACCCTC GGACATGACA CGACGAATTG GGGAACATAC GCAACCAAGG GCGGAATCTA CATCGGCGTC AACCTGTGGA CTACGAGCAG CGACTGCGGC GGGGCCAGCT TCTCCAATAA CGCGGTTTAC CTGTTGCCTA AGGACGCGTT GTACGATGGC GGGGGATACG GCTACTGGTA CTTCACAGGC TTCAATCTTG GCGGGGTAAA CATGGACACC CTGCAGCCAG TCAACGTGAC GGACCGTGCA GACAAGCCGA GTACGATCTT CCTGATGAAT ACGCAGAACT ATAACTTCGG CGGTGGACAT TGCTCGAGCG CCTGCAATGA AATGGTGCTC TGGGGAATAT CGGGACCGAC AGCCGGAACG GTTCCTGATC CACACAATCC ATTTGCGTTC CTGCAAGGTG GAAATGGACC GATCGTGACG TCGAAAGTTC TGACCACATT GCAAAATTTC ACTTTCCCAG TGAATGCGGC GGAGCCAGGG TGCACTACGT CCGGTTCTCC GTGCGTGGAT ACGGACTATG TATTCATTTC CGGAGCGGTG AAATACCACG CTGGAGAGAT CTTTGGTTCG TTCAACACGG CTGTGGCAAG CAGTCCGGCA ACCACGGGGC CGATCTGGTT CGACGTGCAT CCATCAACCG ACAACAATGG TCAGGTGACG AATGCCGTAA TCCGCCAGGA GGATTGTTTC CTCTGCGGCG GCTGGGCCAA TAGCGGCTCC GCCTACTACG CAAACCTGCA GCCAGACCAG GAAAACAACG TGGTCATGAT CTACAACTAC TCCGACAATC TGACATATCC CAGGAGCCAG TTGACGTCAC GCCGAGTCAC CTACGGCGAC TCACTCATGG ATGGTGCAGG CAGCTATTTC AACACCGGGG GCACGGGATT CATGTCGGGC AGGTGGGGAG ACTACACGGC CACCGCGCCC GATTTCACGA TTGCGAATCG CGGGCTGATT TGGATGTCTG GCGAATATGC GACGCCGAGC GGTTGGGCGA CCATCATTGG CTGGACACAG TATCTCAACT CGGATGACCA GTAG
|
Protein sequence | MRNMRNNTIV LLASWVVWCA IALVMAMPAG AQERETVRDR DDKLKGTVSE SQLDAALQRG LPGRVMTPMP ANAKATVEKS GGLRGAPARS VEMADIPQKT TTSSIPGLAD GGRPLSGLTE DEYQALKRLV AMRAARGEVG TKPSTLALRG GVKAIVRPVQ MTQITPNAAT AHASFFYGQK ENGLDPPDMG LATSENFVVQ VVNASIAVYA KNGVLQAGFP KDADTFFGVA AGTFIFDPRA FYDWANHRFF VLMDTFTSGT AGGSLYFAIS KTQDPRGGWW IYHFTPAGLG AGICGDFPTL GHDTTNWGTY ATKGGIYIGV NLWTTSSDCG GASFSNNAVY LLPKDALYDG GGYGYWYFTG FNLGGVNMDT LQPVNVTDRA DKPSTIFLMN TQNYNFGGGH CSSACNEMVL WGISGPTAGT VPDPHNPFAF LQGGNGPIVT SKVLTTLQNF TFPVNAAEPG CTTSGSPCVD TDYVFISGAV KYHAGEIFGS FNTAVASSPA TTGPIWFDVH PSTDNNGQVT NAVIRQEDCF LCGGWANSGS AYYANLQPDQ ENNVVMIYNY SDNLTYPRSQ LTSRRVTYGD SLMDGAGSYF NTGGTGFMSG RWGDYTATAP DFTIANRGLI WMSGEYATPS GWATIIGWTQ YLNSDDQ
|
| |