Gene Acid345_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1903 
Symbol 
ID4069381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2284969 
End bp2285817 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content58% 
IMG OID637983914 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_590978 
Protein GI94968930 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.25845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00938968 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTCG CATTCTTAGG GTTGGGGATT ATGGGGCGTC CGATGGCGGC GAACCTTGCT 
AAGGCCGGCA ACGAAGTCAC GGTTTGGAAC CGCACACCGA AGGATGTCGA AGGCGCGCAC
GTTGCGAAGA CTCCTGCGGA AGCCGCTAAA CATGCGGATG TGGTGTGGAT GTGCGTGTCG
GATACGAACG CGGTGGAGCG CGTATTGTTT GGCGACGGTG GCGTGGAACC CGTGCTGCGG
GCGGGGATGG TGGTGGTGGA CTCGAGCACG ATTTCGCCGG TGGAGACGCT GAAGTTTGCC
GAGCGCGTGC GCGCGAAGGG CGCGGATTAC ATCGACGCGC CGATCACGGG ATCGAAGATC
GGAGCGGAGT CGGCACAGTT GATCTTCATG GTCGGTGCGA AAGACGAGAC GTTGAAGAAA
CTCGAACCGC TCTTCCTGCA GATGGGGAAG AAGATCGTGC ACATGGGCGA AGTGGGGAAG
GGGCAGGCGT CGAAGATTTC GCTGAACCTG CAAATCGCCT GTATTTATGA GGGTTTCATC
GAGGGCTTCA AAGTCGCTAC GCAACTCGGC GTGAACCCAG AAAAATTTGT TGAGCTGGTG
CAGAGCACGA TGGTGCGATC GGGAGTGGTG GATTACAAGG CGCCGTTCGT GTTGAAACGC
GACTACACGC CGAACTTTCC GCTACGTTTA ATGCGCAAGG ACCTGCTGCT GGTGAGCGAT
GCGGCGAAGC AGTTGGAGCT GGATTTGCCG GGGCTGAAAT CTGTTCTCGA GGTTTATGAC
GAGGCGCACG AGGCCGGTAT GGATGACCAG GATTACGCGG CTACGCTGGC ACTTTTGGAA
CGAAATTAG
 
Protein sequence
MKVAFLGLGI MGRPMAANLA KAGNEVTVWN RTPKDVEGAH VAKTPAEAAK HADVVWMCVS 
DTNAVERVLF GDGGVEPVLR AGMVVVDSST ISPVETLKFA ERVRAKGADY IDAPITGSKI
GAESAQLIFM VGAKDETLKK LEPLFLQMGK KIVHMGEVGK GQASKISLNL QIACIYEGFI
EGFKVATQLG VNPEKFVELV QSTMVRSGVV DYKAPFVLKR DYTPNFPLRL MRKDLLLVSD
AAKQLELDLP GLKSVLEVYD EAHEAGMDDQ DYAATLALLE RN