| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1901 |
|---|
| Symbol | |
|---|
| ID | 4069378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2283566 |
|---|
| End bp | 2284195 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637983911 |
|---|
| Product | beta-lactamase-like |
|---|
| Protein accession | YP_590976 |
|---|
| Protein GI | 94968928 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.647994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00267047 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCCACG AAATCTTCCC TGTAGGCCCA CTACAGTGCA ACTGCTCCGT CATTGGGGAT
GAAACAACCC ATGAAGCCAT CGTCATTGAT CCGGGTGACG AAGTTGAAGT CGTGGTCGCG
ATCCTGGAGA AACACCAATT GCGGGTTACC CAAATTGTGG TAACTCACGC GCACATTGAC
CACGTGGGCG GCGCAATGAA GCTGAAGGCG CTTACCGGCG CTCCGCTTTT GCTCAACGAG
AATGACGACC AGCTGCTGAA GTTGCTCGAC GTGCAGGCGT CATGGCTTGG GATGAAAGAC
CCCGGCAAAG TTGTGGTGGA CGAGAGCCTG GCGGATGGCG ATAGCGTGAA GTTCGGCACG
ATCGAAGGAT CGGTCATTCA CACTCCGGGA CACACCCAGG GAAGCATCTG CCTGCTGCTC
AAAAGCGAGA AGACTTTGAT TGCGGGTGAT ACGTTGTTCC AAGGCAGCAT CGGCCGTACC
GATCTTCCCG GTGGGTCTTA TGAAAAAATC ATGAAGTCCA TTCACGGAAA ACTACTGGTG
CTGCCGGGGG AGACGATCGT AATTCCCGGA CACGGTCCCA GCACGACGAT TGAAGAAGAG
CGCGAGCGCA ATCCGTTCCT GCGGGGCTGA
|
|---|
| Protein sequence | MIHEIFPVGP LQCNCSVIGD ETTHEAIVID PGDEVEVVVA ILEKHQLRVT QIVVTHAHID
HVGGAMKLKA LTGAPLLLNE NDDQLLKLLD VQASWLGMKD PGKVVVDESL ADGDSVKFGT
IEGSVIHTPG HTQGSICLLL KSEKTLIAGD TLFQGSIGRT DLPGGSYEKI MKSIHGKLLV
LPGETIVIPG HGPSTTIEEE RERNPFLRG
|
|---|
| |