| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1881 |
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| Symbol | |
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| ID | 4073040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2259250 |
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| End bp | 2260347 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637983890 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_590956 |
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| Protein GI | 94968908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.210554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAT GCGAACAATG CGGCGCGGAG TTCTCTAACT GGTTTGGGGA TGTAAAACAT
CGCTGCCCCA AATGCGAGCA GCAAGCTGCC GCCCCGCAGC AGCCGCCTCC ACAAGTGCTC
CTGCCAGACG GCACGCTATC GCCGGCTCCG GTCCAACGCA CGCTGCCCGC GCCGATCGTC
ACTCGCATAT TGATCGGAAT CAATGTGGCG GTGTTTTTAG CGATGGTGCT GCTCACACGC
CAATTCGTGG AGTTCGATAC TCCTACCGCG CTGCGATGGG GGGCGGATTA CGGTCCGGCA
ACCGCCAGCG GCGAGTGGTG GCGCATGCTG ACCTCGATGT TCCTGCACGG CGGTATTTTG
CACATCCTGG TGAACATGTT TGCGCTGCGA AACCTTGGGT ACACCGCGGA ACTGTTCTAC
GGGCGCAAGA ATTTCCTCAT TATTTACATG CTGAGCGGCT TTGGCGGAAG TGCGGCAACG
CTGTTGTGGC GTCCCGACAG CGTGAGCGTC GGTGCGAGTG GTGCGATTTT CGGCGTGGCC
GGAGCGCTCG CAGCGATGGT GTATTTCAAG AAGCTTCCGG TAGACCGTGC ATTGCTGAAA
CGCGACATCG GCAGTATCGG CGCTGTAATC TTCTACAACC TGCTGATCGG CGCCGCATTG
CCGATCATCA ATAACGCGGC CCACGTCGGC GGACTAGTTG CCGGCGCAAT CCTTGGCTTC
ACCCTTCCTG CAATGATTTT CCGGACGGAA CGGGAAAAAT CGAATAGCTC GGGAACTATT
GCCATCGGGA TAGTAATTGC CTTGATTGTC GCAATCGGTA TCACTGGACA CCAGAAGCTG
GCGGCGGAAG AGGAACTCTA TCGCGCCGAT AAGGCTTACG AGGCTGGCAA AAAGAGCGAG
GCGCTGCAAC ACCTGGAACG CGCGGCTGCC ATGCATCCCG AGACTTTCAC CGCTAATTTT
ATGATCGGTG CGATTTATCT CGATGAAGGA CAGCCCGAAA AGGCCGTTCC CTTCCTCGAG
AAAGCTGTGC AATTGCAGCC TGAGAATCGG GCGGCCAAGC AGGCGCTCGA CCGAGCCCGG
AATTCCCTCA ATAAATAG
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| Protein sequence | MAKCEQCGAE FSNWFGDVKH RCPKCEQQAA APQQPPPQVL LPDGTLSPAP VQRTLPAPIV
TRILIGINVA VFLAMVLLTR QFVEFDTPTA LRWGADYGPA TASGEWWRML TSMFLHGGIL
HILVNMFALR NLGYTAELFY GRKNFLIIYM LSGFGGSAAT LLWRPDSVSV GASGAIFGVA
GALAAMVYFK KLPVDRALLK RDIGSIGAVI FYNLLIGAAL PIINNAAHVG GLVAGAILGF
TLPAMIFRTE REKSNSSGTI AIGIVIALIV AIGITGHQKL AAEEELYRAD KAYEAGKKSE
ALQHLERAAA MHPETFTANF MIGAIYLDEG QPEKAVPFLE KAVQLQPENR AAKQALDRAR
NSLNK
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