| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1869 |
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| Symbol | |
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| ID | 4073028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2249207 |
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| End bp | 2250463 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983878 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_590944 |
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| Protein GI | 94968896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.431923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTTC GGCTTGTTTA CCAGTCGTTT CGACGGCAGC AGCGGCGCAA GTTGCTCGCG
GGGGTGTCGA TTGCGTTAGG CGTAACCGTG GCGACTGCGA TGATCGCTGT GGCCACCGAC
ATCGGCGACA AGATCAATCG CGAACTGCGC AGCTACGGCG CGAATATCGC GGTCACCCCG
CAGGCCGACA CGTTGGAAGT GCGCATCGGC GGCGTAGATC TGAAGCCGGT AAACGACGGC
GCATATCTCG CCGAAAAAGA TCTCCCCGAG ATCAAGGGCA TCTTCTGGAG AAACAATATC
CAGGGTTTCG CGCCGTTTCT TCCGGTGCCA GTAACGCTCT CCAACGGCGC GCGAGCCGAT
CTCGTCGGCA CGTATTTCGA GAAGCAACTT CGCTACGGCA AAGAAGATTT CACCACCGGC
GTGCGCAAGA TATCGCCGTG GTGGAAGGTC GCGGGCGAAT GGCCCAAAGA CGATTCAAGC
GATGTACTCG TCGGAGCGAC GCTGGCCAAC TCACTCGGAG TAAAAGACGG GGATCACGTT
GATATTGGCG CTCGTTCCCT ACAGGTTTCC GGTGTATTGA ATACCGGCGG GGCGGAAGAT
AACCAGATCA TCGCGCCGAT GACCTTGGCG CAGGCTGTAC TGGGACGCCC AGGGGTCGTG
AAAAACATCC AGGTCAGTGC GCTGACCAAG CCGGAAGACG ATTTTGCCCG CAGGAACCCG
AAAGCACTGA GCAAGACCGA TTTCGATCGC TGGTTTTGCT CGCCTTATGC GAAATCCATC
GCGTTTCAGT TGCAGGAAGC AATTCCCGGA GCACGCGCGG TGGAGATCCG CCAGGTATCG
CAGAACGAAG GCAATGTGCT CTCGCGCATT GAAGGGCTGA TGTTGCTGGT GACGATCGCA
GCTCTTCTCG CATCTGCACT CGCGGTTTCT GCGGCGATGG CGACAGCGAT CCTCGAACGC
CGCAGCGAAG TCGGCTTGAT GAAAGCCATG GGAGCAGCAA ACTCAGCAAT CGCCGGTCTG
TTCTTCACCG AAGCGGCGCT GCTCGCTCTC ATAGGCGGCG CTGTCGGCTT CGGCATTGGA
GCCCTGCTGG CACGGCGTAT CGGACTCTGG ATCTTCGGGT CACAGGTTTC GATCTCGCCT
GTGCTCTTCC CTGTCGTGTT GACGATCGCA GCAATCGTGA CGTTCGTCGG GAGCGCGGCA
TCCATTCGTA AAGCCCTGCG TTACGAACCC GTGATGGTGC TGCGAGGTGA GGCGTAG
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| Protein sequence | MFLRLVYQSF RRQQRRKLLA GVSIALGVTV ATAMIAVATD IGDKINRELR SYGANIAVTP
QADTLEVRIG GVDLKPVNDG AYLAEKDLPE IKGIFWRNNI QGFAPFLPVP VTLSNGARAD
LVGTYFEKQL RYGKEDFTTG VRKISPWWKV AGEWPKDDSS DVLVGATLAN SLGVKDGDHV
DIGARSLQVS GVLNTGGAED NQIIAPMTLA QAVLGRPGVV KNIQVSALTK PEDDFARRNP
KALSKTDFDR WFCSPYAKSI AFQLQEAIPG ARAVEIRQVS QNEGNVLSRI EGLMLLVTIA
ALLASALAVS AAMATAILER RSEVGLMKAM GAANSAIAGL FFTEAALLAL IGGAVGFGIG
ALLARRIGLW IFGSQVSISP VLFPVVLTIA AIVTFVGSAA SIRKALRYEP VMVLRGEA
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