Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1867 |
Symbol | |
ID | 4073026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2246868 |
End bp | 2248094 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637983876 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_590942 |
Protein GI | 94968894 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC TGGAACACGT CAGCAAGCTG TACCCTGCAC GCGCCGAGCG CGATGCCGCC ATGCTCAAGG CGCTTGACGA CGTGAGCTTG CACGTGAATC CCGGCGAGTG GCTCGCCGTC ATGGGCCCTA GCGGCTCCGG CAAATCGACG CTCGTCAATC TCATCGGTTG CCTGGACCAG CCGAGCAGCG GCGCCATATG GCTCGACGGC GAAAACGTCG CAGAACTGCC GCCTTCTGAA CTGACTCGCG TACGGGCTGA GAAGATTGGC TTCGTCTTCC AGCAATTCCA TCTGATTCCG TATCTCACCG CGATTGAGAA CGTCATGCTC GCGCAATACT TTCACAGCAT GACCGACGAG CAGGAAGCGC GCCAGGCGCT GGAGCGCGTG GGTCTGGCTG ATCGCGCCAA TCATCTTCCC TCGCAGCTCT CCGGCGGCGA ACAGCAGCGC GTTTGCATTG CGCGCGCTCT TATCAACGAC CCCAAGATCA TCCTCGCCGA CGAGCCCACC GGCAATCTCG ACGCTCAGAA CGAAGAGATC GTGCTCCGAC TCCTGCGTGA ACTCCACGAC GCCGGACGCA CCATCGTGAT GGTCACGCAT GATCCTGTAA TGGCGCGCCT CGCGGATCGC ATGATCGAGT TGCATCACGG CCGCTTGAGC CACGAACAGA TCTTCTCGCT TAACGACCAG GAACAGTTCG ACGAATTACT CGAAGAAATC TGGGTCACGG AAGAACACGG CGAACTTGCC GAGGTTGGTC GCCTCGACGA TCACGGCGCG TTGCCCGTCC CCATTGCTGT CGAAAAGATG GTCGAGCTCG GACTCTTGAC CATGCAGAAA CACGGCCCAA AGTCGCACGG ACACAAGCGC GTCATCAATC CGTGCCACGA CGCAATCCGT CAGCAGCAAC ACGTTCTTCC TGAGGACGGC GAGTTCATCG TGCAGTTCAC CCAGCGCGGC CGCGAGATGG CGGAGAGCAT CATTCGCCGT CACCGTCTTG CGGAGCGGCT CTTCACGCAA AGCTTTCAAA TGCAAAACCA GGAAGAGATC GAGGAGCAGG CCTGCAAGTT CGAGCACATC CTCTCACCAG AAGCGACCGA GAAGATATGC ACCTTCCTCA ATCACCCGCG GGCGTGCCCG CATGGCGCGC CGATCCCAAT GGGAGCATGT TGCCGGGCTG CACGGTTACT CGGGCACGAT GCCGTCGAGG AAAACGTTCG GCAATAG
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Protein sequence | MIRLEHVSKL YPARAERDAA MLKALDDVSL HVNPGEWLAV MGPSGSGKST LVNLIGCLDQ PSSGAIWLDG ENVAELPPSE LTRVRAEKIG FVFQQFHLIP YLTAIENVML AQYFHSMTDE QEARQALERV GLADRANHLP SQLSGGEQQR VCIARALIND PKIILADEPT GNLDAQNEEI VLRLLRELHD AGRTIVMVTH DPVMARLADR MIELHHGRLS HEQIFSLNDQ EQFDELLEEI WVTEEHGELA EVGRLDDHGA LPVPIAVEKM VELGLLTMQK HGPKSHGHKR VINPCHDAIR QQQHVLPEDG EFIVQFTQRG REMAESIIRR HRLAERLFTQ SFQMQNQEEI EEQACKFEHI LSPEATEKIC TFLNHPRACP HGAPIPMGAC CRAARLLGHD AVEENVRQ
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