Gene Acid345_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1852 
Symbol 
ID4069194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2230237 
End bp2230938 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID637983861 
ProductPirin-like 
Protein accessionYP_590927 
Protein GI94968879 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC TACGCCCCGC TGCCGAACGC GGCCACACCA ACCACGGTTG GCTCGAAACC 
TACCACACCT TCTCGTTTGC TGATTTTCAC GATCCCCGGC GCATAGGGTT CCGCGAGCTG
CGCGTCATTA ACGATGACCG TGTCGCTGCG GGCGAGGGCT TCAGCCCGCA CTCGCATCGC
GATATGGAGA TCATCACCTA CATGGTGGAA GGGCAACTCG AACACCGCGA CAACCTGGGC
AACGGCGCCG TCCTCAAGCC GGGCGATGTC CAGCACATGA CAGCCGGTAC CGGCGTGGTC
CACAGCGAGT TCAACCACTC GCAAGAGAAG CCGCTGCGCC TGCTCCAGAT CTGGATCTTC
CCGGAGAAGA AGGGACTTGT CCCGGATTAC CAGGACCGTC ACTTCGATCC TCAGGACCGC
GTGGATCGTC TGCGTCTGAT TGCCTCAACC GACGGCCGCG ACAACTCGCT GATCATCAAC
CAGGACGTGG ACCTCTATGA CAGCTCTCTG ACCCATGGCA CCGAAGTGCA ACTCGCGCTT
CGCCCCGAGC GTCACGCGTG GCTCCAGGTC ATCAACGGCG AACTGGCACT GAACGGCCAA
ACCCTTAAGA CTGGCGACGG CGCCGCCATC TCCGCCGAAA CCGCGCTCAA AATCAGGGGA
CAGTCGGAAA ATGCAGAATT CCTGCTCTTT GACCTGAAAT AA
 
Protein sequence
MITLRPAAER GHTNHGWLET YHTFSFADFH DPRRIGFREL RVINDDRVAA GEGFSPHSHR 
DMEIITYMVE GQLEHRDNLG NGAVLKPGDV QHMTAGTGVV HSEFNHSQEK PLRLLQIWIF
PEKKGLVPDY QDRHFDPQDR VDRLRLIAST DGRDNSLIIN QDVDLYDSSL THGTEVQLAL
RPERHAWLQV INGELALNGQ TLKTGDGAAI SAETALKIRG QSENAEFLLF DLK