| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1830 |
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| Symbol | |
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| ID | 4072891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2209836 |
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| End bp | 2211185 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983839 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_590905 |
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| Protein GI | 94968857 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.223746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAA TCGCTCCTTT CGAACCTGCT ACTACGCCGG ATCAGACAGA GCAGTACGCT
ATACTAAAAA ATTCGAGACG CATGGCCGCA ACCTCTCATA ACCATCTGAA CGGCAACGGT
ATTGGACACG GTGGCCGTCG CAGCATGCTC GTGCCCGGCA TCCTGCTGCT TGCCGTTATT
GTCGGGGCGA CCATGCTGGT CACCCGCAAG GGAACGTCAT CCATCCGCGC CGACCGCGTG
CAGCGCGGCT CGCTCACAGC TACCATTTCG ACCAACGGTA AAGTGGAACC CGTGGCGGAT
TTCCAGGCGC ACGCCCCAAT TTCCACTACC GTCCAAAAGA TCTACGTCAA GGCGGGCGAC
CACGTAAAAA AAGGCCAGAT CCTGCTTACG CTTGATGATG CCTCCGTCCG CGCTCAATCG
GCACGTGCTT TTGCCCAGTT GAAGACCGCC CAAGCCGAGC AAGCCGCCGT GCAGAACGGC
GGCAGCCGCG AAGAGGTCAT CAATCGCCAA TCGCAATTGG TGAAGGCCCA GGCCGACCGC
GATGCTGCGC AACGCAATCT CGCCGCGCTA CAGAAGTTGC TGCAATCCGG GGCTGCCTCT
CCGGCGGAAG TACAGGCTGC TGAGAACCAG CTCAGAGTTT CAGAAGCAGC GGTGAGCTCT
CTCCAGCAGA CTGGCACCCA GCGCTACTCT CCACAGGATG CAACGCGGGT GCAGGCTTCG
GAAAAAGAAG CGCAGGCAAC GTACGACGCC GCACAAGCAA CTCTCGGACA GACGAACATC
CGTTCTGACG TGGAAGGCAC GGTCTATTCC CTGCCGGTAC GCGAAGGAAC GTTCGTCAAT
CCTGGCGATC TGCTGGTTGG CGTAGCTGAA TTGAAGACCA TCGAAGTGCG TGCATTCATT
GACGAGCCGG ACCTTGGTCG CCTTTCGCAA GGCGAGCAGG TCAACGTGAG TTGGGACGCA
CTGCCCGGCC GCACCTGGAC TGGCACCGTG ACCCGCGTTC CATCCACGGT CGTAACGCGT
GGCACGAGAA TGGTCGGCGA GATCCTGGTT AACGTTCCAA ACGACGACGG CAAGCTGCTG
CCGAATATCA ACGTGACGGT CTCGATCATC ACGGCGCAAA AGAACGATGT CATCACCGTG
CCGCGCGAAG CCGTACGCCA GGACGGCGGC GACAAATACG TTTACGTGGT TGCTGACGGC
CACATCAAGC GCCAGAACAT CCAAACCGGC ATCTCAAACC TTACGCGCGT CGAGATTTCC
GGCCTCCCGG AAAAGACCCT CGTCGCGTTG AACTCCCTGA ACATGCAGCC CCTGCAGGAC
GGGATGAAGG TCAAAGTAGC CGGACAATGA
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| Protein sequence | MPKIAPFEPA TTPDQTEQYA ILKNSRRMAA TSHNHLNGNG IGHGGRRSML VPGILLLAVI
VGATMLVTRK GTSSIRADRV QRGSLTATIS TNGKVEPVAD FQAHAPISTT VQKIYVKAGD
HVKKGQILLT LDDASVRAQS ARAFAQLKTA QAEQAAVQNG GSREEVINRQ SQLVKAQADR
DAAQRNLAAL QKLLQSGAAS PAEVQAAENQ LRVSEAAVSS LQQTGTQRYS PQDATRVQAS
EKEAQATYDA AQATLGQTNI RSDVEGTVYS LPVREGTFVN PGDLLVGVAE LKTIEVRAFI
DEPDLGRLSQ GEQVNVSWDA LPGRTWTGTV TRVPSTVVTR GTRMVGEILV NVPNDDGKLL
PNINVTVSII TAQKNDVITV PREAVRQDGG DKYVYVVADG HIKRQNIQTG ISNLTRVEIS
GLPEKTLVAL NSLNMQPLQD GMKVKVAGQ
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