| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1812 |
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| Symbol | |
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| ID | 4070499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2190510 |
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| End bp | 2192171 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637983821 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_590887 |
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| Protein GI | 94968839 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCGA TTGACGTTGA TGGAGGGCTG TGCGGATCGC TTCCGCCAGA CCGTATGACC
CAAGCCGGAA TCCAACGTTC GCGGGACGAC GTTCCCAAGA CTGACGCGCC CCTGACGATC
GCTTACGTCG ACGATAGCGA TCCGCAGCGG TACGCGATTT CGCGCATGCT TTCGGCTGCA
GGCTTCCATG TGAAACAAGC TGCGACGGGA CAGCAGGGTC TCGATCTGGC GCAGGAGCTG
CCGGACCTGA TGCTGCTGGA TGTGCAGCTT CCGGACATCA ATGGAATTGA AGTTTGCCGG
CGAATCAAGA GTGATGCGCG CACGTGCGAG ATCCCGATCC TGCAAGTTTC CGCCGCGTTC
ACCGATCCGG AACACAAGGC GGCGGCGCTG GAATCGGGCG CAGATGGCTA CCTGACTTTC
CCATTTAACT CGGTAGAACT GGTGGCGATT GTGCGCGCGC TGATGCGCAC GAAGCGTGCG
CAGGCGGAGT TGAAGGAGCG CTACACCGAG TTGCAGGCCG CGCACGAAGC GCTTGCGGAA
CGCGAGAAAC AATTCCGCGC GGTATTCGAC AACGCCATGG ACGCGATGAT TATCTGGGAC
GATCGGGGCC GGTTCACGGC GGCGAACCCG GCGGCGAGTG AGTTGTTCGC GGTGCCGAGG
GAACGGCTCG TAGGGGCGAC AATTGAGGAC TTCTTAAGTT TCAAGGACAG GGAAGAGGTT
GCCGGCTCGC TGCGCGCGTC GGAGATATCT GGTCGACGTG GCGAGTTCGA ACTGCGCAAG
CCGAATGGAG GCGTCCGGCA GATCGAATAC ACAGCGACCG TGGATTTCCA GGCGCACCGT
CATCTGTCCA TCATGCGCGA CATTACCGCC CGCAAGGCGG CCGAGGCAGA GGTGCGAAAG
CTAAATGCCG AGTTGGAGCG TCGGGTGGAG CAGCGCACGG CGCAGTTGCA GGAAGCGAAT
CAGGAGTTGG AGGCGTTTTC GTATTCGGTG TCGCACGACC TGCGCGCACC GTTCCGGCAC
ATCTCAGGAT TTTCAGATTT GTTGCTGCGG CACCTGACGA ATACCGACGA GACGACTCGG
CACTATGTGC GGACGATTGC CGAGTCGGCG CAGTACGCGG GCGCACTTGT GGACAATCTG
CTGGCGTTCT CGCGGATGTC GCGCTCACAA CTGCGCTGGA TTCCTGTGGA TATGAACCTG
CTGTTGAAGG AAGTTGTCCG CGATGTGATG CGCGAGGCAA ACGGGCGCGT GATCCACTGG
ACTCTGCCGG ACCTGCCAAT CGTGTTTGCC GACGGCGCGA TGCTCAAGCT GGCGATGCGT
AACCTGCTGG CAAACGCGGT GAAGTACACG CGGCACAAGG CGGAGGCGGA CGTGGAAGTG
GGCGTCCGCG AGCATGCGAA TGAGTGGGAG TTTTGGGTAA AAGATAACGG CGTTGGCTTC
GACGAGAAGT ATGCAGACAA ATTATTTGGC GTGTTCCAGC GGCTGCATCG CATGGAGGAG
TTTGAAGGGA CAGGGATAGG CCTCGCCAGC GTGCGGCGGA TCGTACAGCG GCATGGCGGA
CGGGTTTGGG CCGAAGGCGT AGTGGACGAG GGGGCGGCGT TCTATTTCAC GTTGCCGAAG
GTACAAGAAG ACGCGATGGA GGAGAGCGAT GGCAGAGCTT AA
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| Protein sequence | MAPIDVDGGL CGSLPPDRMT QAGIQRSRDD VPKTDAPLTI AYVDDSDPQR YAISRMLSAA
GFHVKQAATG QQGLDLAQEL PDLMLLDVQL PDINGIEVCR RIKSDARTCE IPILQVSAAF
TDPEHKAAAL ESGADGYLTF PFNSVELVAI VRALMRTKRA QAELKERYTE LQAAHEALAE
REKQFRAVFD NAMDAMIIWD DRGRFTAANP AASELFAVPR ERLVGATIED FLSFKDREEV
AGSLRASEIS GRRGEFELRK PNGGVRQIEY TATVDFQAHR HLSIMRDITA RKAAEAEVRK
LNAELERRVE QRTAQLQEAN QELEAFSYSV SHDLRAPFRH ISGFSDLLLR HLTNTDETTR
HYVRTIAESA QYAGALVDNL LAFSRMSRSQ LRWIPVDMNL LLKEVVRDVM REANGRVIHW
TLPDLPIVFA DGAMLKLAMR NLLANAVKYT RHKAEADVEV GVREHANEWE FWVKDNGVGF
DEKYADKLFG VFQRLHRMEE FEGTGIGLAS VRRIVQRHGG RVWAEGVVDE GAAFYFTLPK
VQEDAMEESD GRA
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