Gene Acid345_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1801 
Symbol 
ID4071991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2180432 
End bp2180842 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content55% 
IMG OID637983809 
Producthypothetical protein 
Protein accessionYP_590876 
Protein GI94968828 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.611763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGT CCACGTCGAA AGAAGAAAAA CACTTAGATT TTCAGGGTTT TGCCACCACT 
GCCTCGAACC TCGTCGGCAC CCGCTGGTCG TTCCTCGCCG CGGTCATCAT CATCGTCGCG
TGGGCTGTCA CCGGGCCAAT CTTTCACTAC TCCGACACCT GGCAGCTCAT CATCAATACC
GGCACCACCA TCGTCACGTT CCTCATGGTC TTCCTCATCC AGAACACGCA GAACCGCGAC
GCGCGTGCCA TCCACCTGAA GCTTGATGAA ATCATCCGTT CGATTCACCA CGCGCACAAC
GAGATGATCA ATATAGAAAA GCTCTCGGAC GAAGAATTGT CGGAGCTAGC GAAACAATAC
GACGCCATCC GCGACGAATG CGAAGCCCGC AAATCCCGCC AAGCCGCCTG A
 
Protein sequence
MAQSTSKEEK HLDFQGFATT ASNLVGTRWS FLAAVIIIVA WAVTGPIFHY SDTWQLIINT 
GTTIVTFLMV FLIQNTQNRD ARAIHLKLDE IIRSIHHAHN EMINIEKLSD EELSELAKQY
DAIRDECEAR KSRQAA