Gene Acid345_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1789 
Symbol 
ID4071979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2169248 
End bp2169784 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID637983797 
Producthypothetical protein 
Protein accessionYP_590864 
Protein GI94968816 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.288402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAGTT CCCTGTTTGT CTCAGCACTA GCCGTTGCCA CCGTGCTCAC CCTTGCACCT 
CGCGGGCTGC ACGCACAGGC CCCGTCAGAC CCACAGATCG CAGGCGTGGT GCAGACCGCG
AACAAGATCG ACATCGACAC GGCGCATATT GCGCTGCAGA AGTCGAAGGA CGCGCAAGTG
AAAGAGTTCG CCAACCAGAT GATCGCCGAC CATACCAGTC TCGAAAAGTC GGTTGCCGAT
CTCGCCAAGA AATTGAATGT CACACCGCAG GACAGCGACA TCTCGAAGCA GTTGAAGCAA
GGCGCGGCCG ACGAGGCGAA GAAACTCAAG TCGCTTAGCG GAAAAGCTTT CGATCAGGAA
TATGTTTCGC ACGAAGTTGC CTACCATCAG GCGGTCATCG ATGCGGCGAC GAAAACGCTG
ATCCCGAATG CGCAGAATGC GGAGCTGAAA TCTGCTCTGC AAGGCGCCGC ACCGCTTTTG
CAGGGACATC TCGAGCACGC CCAGCACCTA CAGCAATCGT TGCAGGGCGC ACAGTAA
 
Protein sequence
MRSSLFVSAL AVATVLTLAP RGLHAQAPSD PQIAGVVQTA NKIDIDTAHI ALQKSKDAQV 
KEFANQMIAD HTSLEKSVAD LAKKLNVTPQ DSDISKQLKQ GAADEAKKLK SLSGKAFDQE
YVSHEVAYHQ AVIDAATKTL IPNAQNAELK SALQGAAPLL QGHLEHAQHL QQSLQGAQ