Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1789 |
Symbol | |
ID | 4071979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2169248 |
End bp | 2169784 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637983797 |
Product | hypothetical protein |
Protein accession | YP_590864 |
Protein GI | 94968816 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.288402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAGTT CCCTGTTTGT CTCAGCACTA GCCGTTGCCA CCGTGCTCAC CCTTGCACCT CGCGGGCTGC ACGCACAGGC CCCGTCAGAC CCACAGATCG CAGGCGTGGT GCAGACCGCG AACAAGATCG ACATCGACAC GGCGCATATT GCGCTGCAGA AGTCGAAGGA CGCGCAAGTG AAAGAGTTCG CCAACCAGAT GATCGCCGAC CATACCAGTC TCGAAAAGTC GGTTGCCGAT CTCGCCAAGA AATTGAATGT CACACCGCAG GACAGCGACA TCTCGAAGCA GTTGAAGCAA GGCGCGGCCG ACGAGGCGAA GAAACTCAAG TCGCTTAGCG GAAAAGCTTT CGATCAGGAA TATGTTTCGC ACGAAGTTGC CTACCATCAG GCGGTCATCG ATGCGGCGAC GAAAACGCTG ATCCCGAATG CGCAGAATGC GGAGCTGAAA TCTGCTCTGC AAGGCGCCGC ACCGCTTTTG CAGGGACATC TCGAGCACGC CCAGCACCTA CAGCAATCGT TGCAGGGCGC ACAGTAA
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Protein sequence | MRSSLFVSAL AVATVLTLAP RGLHAQAPSD PQIAGVVQTA NKIDIDTAHI ALQKSKDAQV KEFANQMIAD HTSLEKSVAD LAKKLNVTPQ DSDISKQLKQ GAADEAKKLK SLSGKAFDQE YVSHEVAYHQ AVIDAATKTL IPNAQNAELK SALQGAAPLL QGHLEHAQHL QQSLQGAQ
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