Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1782 |
Symbol | |
ID | 4072842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2160215 |
End bp | 2162203 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983790 |
Product | excinuclease ABC subunit B |
Protein accession | YP_590857 |
Protein GI | 94968809 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.753339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCA AGGTAAGCTC CCCGTATAAA CCTCAGGGCG ACCAAGCCCG TGCGATTGAA CAACTGACCG GCGGGATTCG CGACGGCGAA AAGCACCAGG TGCTGCTCGG CGTAACCGGC TCCGGTAAGA CCTTCACGAT GGCGAAGATC ATCGAGCAGC TGAACCGCCC GGCGCTCATC CTGGCGCACA ACAAGACGCT GGCGGCGCAG CTTTATCACG AGTTCAAGAA CTTCTTCCCG AACAATGCTG TCGAGTACTT CGTCTCGTAT TACGACTACT ACCAGCCGGA GGCCTACATC CCTGCTGGCG ACGTTTATAT CGAGAAAGAA GCGACGGTTA ACGACGAGCT AGACAAGCTA CGGCTCGCAG CGACCCGGTC CTTGTTCGAG CGGCGCGACG TGATCATCGT GGCGAGCGTG AGCTGCATCT ACGGCCTTGG TTCGCCGGAA GCGTACTACG GCATGTTGCT CTTCCTCGAG AAGGGCCAGC GCATCAAGCG CGACGACATC CTGAAGAAGC TGGTCGAGAT CCTTTATGAG CGCACCAACG AAGATTTCCG GCGCGGAACC TTTCGAGTGC GCGGCGACGT AATCGAGATC TTTCCGACTT ACGAAGACAC CGCCTATCGC ATTGAGATGT TCGGGGACGA AGTCGAGTCG CTCTCGCAGA TTGATCCGCT GTTCGGCACG GTAAAACAGA AGTACCAGCG GCTGCCGATT TATCCGAAAA CGCACTACGT GATGAAGCCG GAGCGCAAGA ATTCGGCGGT TACCACGATT CTTGAAGAAC TCGGCTGGTG GGAGAACGAA CTGCAGAAGC AGGGACGCCT GGTGGAATCG CAACGCATTC ACCAGCGCAC GCGCTTCGAT CTCGAAATGA TCAAGGAGAT GGGCTACTGC CACGGCATCG AGAACTACTC GCGGCACTTT ACCGGCCGAC TACCAGGCGA GCCGCCGCCG ACGTTGCTCG ACTACATGCC GCGGGAGTTC TTGCTCTTCA TTGACGAGTC ACACCAGACC GTCCCGCAGC TACATGGCAT GTGGCACGGC GACCGTTCAC GCAAAGAGAA CCTGATCGAG TACGGCTTCC GGCTGCCGAG CGCGTTGGAC AATCGTCCGC TGACGTTTGA AGAGTTTGAG AACCGCGTGA ACCAGGCGGT GTACGTTTCG GCGACGCCGG GACCGTATGA GCTGACGAAA GCCGCAGGCG TGGTCGTGGA GCAGATTATT CGCCCGACGG GATTGATCGA CCCGGAAGTC GAAGTCCGTC CGGTAAAAGG ACAGATTGAC GACCTGCTGC ACGAGATCCG GAAGCGCGCG GAAAAGAGAG AACGCGTGCT GGTGACGACT CTGACCAAGC GCATGGCCGA GGACCTCAGC GAGTACTACA CCGAGGTCGG CGTGCGCTGC CGCTACATGC ACTCCGAGAT TGAAACGCTG GAGCGCATCA AGATCCTGCG TGATCTTCGC AAGGGTGAGT TCGATGTATT GATCGGCATC AATCTGTTGC GCGAAGGGCT CGACTTACCT GAGGTTTCGC TGGTGGCGAT TCTGGACGCC GACAAAGAAG GCTTCCTGCG CTCGCAGGGC TCGCTCATCC AGACCATGGG CCGTTGCGCC CGTAATCTCG AAGGGCGCGC GATCCTTTAT GCGGACCGCA TGACTGACTC GATGAAGAAG GCGATGGACG AGACCTATCG TCGCCGCGCG ATTCAGGAGG CTTACAACGT GGAGCACGGC ATCACGCCGG AGTCGATCGT TCGCCCAGTA GATATGGCCC TGGCTGCGAT CGTGGGCGCG GACTACGTGG ATCTCACCGC GCAGCCGGAT GAGATACCGG AGTTCAAATC GCAGGAGCAG TTGGATAAGT TCGTGGAGAA ACTCGAGGGC GAGATGCGCG AAGCGGCCAA GCGATTTGAG TTCGAGAAGG CGGCGAAGCT GCGCGATCAG ATCAAGGAAC TACGGACCAA AGAGTTCATG TTCACTTAG
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Protein sequence | MDLKVSSPYK PQGDQARAIE QLTGGIRDGE KHQVLLGVTG SGKTFTMAKI IEQLNRPALI LAHNKTLAAQ LYHEFKNFFP NNAVEYFVSY YDYYQPEAYI PAGDVYIEKE ATVNDELDKL RLAATRSLFE RRDVIIVASV SCIYGLGSPE AYYGMLLFLE KGQRIKRDDI LKKLVEILYE RTNEDFRRGT FRVRGDVIEI FPTYEDTAYR IEMFGDEVES LSQIDPLFGT VKQKYQRLPI YPKTHYVMKP ERKNSAVTTI LEELGWWENE LQKQGRLVES QRIHQRTRFD LEMIKEMGYC HGIENYSRHF TGRLPGEPPP TLLDYMPREF LLFIDESHQT VPQLHGMWHG DRSRKENLIE YGFRLPSALD NRPLTFEEFE NRVNQAVYVS ATPGPYELTK AAGVVVEQII RPTGLIDPEV EVRPVKGQID DLLHEIRKRA EKRERVLVTT LTKRMAEDLS EYYTEVGVRC RYMHSEIETL ERIKILRDLR KGEFDVLIGI NLLREGLDLP EVSLVAILDA DKEGFLRSQG SLIQTMGRCA RNLEGRAILY ADRMTDSMKK AMDETYRRRA IQEAYNVEHG ITPESIVRPV DMALAAIVGA DYVDLTAQPD EIPEFKSQEQ LDKFVEKLEG EMREAAKRFE FEKAAKLRDQ IKELRTKEFM FT
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