| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1778 |
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| Symbol | |
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| ID | 4072838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2155898 |
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| End bp | 2157298 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983786 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_590853 |
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| Protein GI | 94968805 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.557659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATG ACTATCGCAT ACGTTTTCTG ATCGTGGATG ACCAGCAGAG CATTCGCAAG
CTTTGCATCG CCATCGGCAA CACCCTCGGC TTTATCTGCA GCGAAGCCGA GAGCGCCGAA
GCCGCACTGG CGGCGCTCGA AACGCAATCG CCCGACATCA TTCTTGCCGA CTTACGCATG
GGTGAGTTGA GTGGCATCGA TTTCCTCGCC AGTGTGAAGA AGCTTCTGCC GCGCACCGAA
GTCGCCATCA TGACCGGCTA TGGCTCGATC GAAACCGCAG TGCAATCGAT GAAACTCGGC
GCTTACGACT ACATCACCAA GCCGTTCCGC GTGGAAGAAC TCAAGATCAT TCTGCAGAGA
ATGGCGGAGA AAGTCCGTCT CGTGGCCGAA AACCACTTCC TGCGCGAACG TGTGAACACC
GAGATGGAAT TGCACGGCAT CGTGGGATCT TCAGCAAAGA TCCAGGATGT GCTGCGCATG
GTCGGTCGCT TGAAAGACAC GCGGACCCCG GTGTTGATCT GCGGCGAGAG CGGTACAGGA
AAAGAACTCG TCGCCCGCGC CATGCACTTC CGCGGCGGCT TTGCGAAGCG TCCGTTCGTC
GCGGTGGATT GCGGGTCGCT GGTTCCCACC CTGATTGAGA GCGAACTCTT CGGCCACGAG
AAAGGCGCGT TCACCGGCGC GATCAAGCCG AAAGAAGGTC TGTTCCAGGC AGCGAACGGC
GGCACCATCT TCCTCGACGA AATCGGTGAA CTTCCGCTGG ACTTGCAGGC CAAGTTGCTC
CGCGTCCTTC AGGACAAGCA GGTCCGACCG GTGGGCAGCA ATCAATCCGT TAAGGTAGAT
GTACGCGTGA TTGCCGCGAC CAACCGTGAT CTTGAGGCCG GCTACAAGAC CGGGACGTTC
CGCAAGGACC TTTACTTCCG CCTGAACGTA GTCACGGTTT ATCTACCGTC ATTGCGTGAG
CGGAAATCCG ATATTCCTTC GCTCATCCAG CATTTCATCG ATCGCCCCTC TGCTGGCCGC
GAGGGTGTCG AAGTGACCTC TCAGGCGATG AAGAGCCTGA TGCAATACGA CTGGCCGGGC
AACGTCCGCG AGCTGGAGAA CTGTATCGAA CGCGCCGTCG CGCTCGGCAA TGGGGAAGTG
ATCGATGTTG ACGATCTCCC GCCCTCATTG CAGGCCATGG CGCCGAAGAA AAATGCGCCA
GCCGTCTCCG AAGGCTACGA CTCCACCGAT CTCGAGGACA TAGAACGCAC AACAATCCAG
CGGGTCTTCG ATCAAGTGGG CGGAGACAAG GGGCTCGCTC TCAAAATGCT CGGGATTAGT
CGTGCGACGC TGTACCGCAA AATCAAGCGC TACAACATCG ATATCTCACG CACGGCGAGG
GCAGCTGCTT CCGGCGAATA A
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| Protein sequence | MTDDYRIRFL IVDDQQSIRK LCIAIGNTLG FICSEAESAE AALAALETQS PDIILADLRM
GELSGIDFLA SVKKLLPRTE VAIMTGYGSI ETAVQSMKLG AYDYITKPFR VEELKIILQR
MAEKVRLVAE NHFLRERVNT EMELHGIVGS SAKIQDVLRM VGRLKDTRTP VLICGESGTG
KELVARAMHF RGGFAKRPFV AVDCGSLVPT LIESELFGHE KGAFTGAIKP KEGLFQAANG
GTIFLDEIGE LPLDLQAKLL RVLQDKQVRP VGSNQSVKVD VRVIAATNRD LEAGYKTGTF
RKDLYFRLNV VTVYLPSLRE RKSDIPSLIQ HFIDRPSAGR EGVEVTSQAM KSLMQYDWPG
NVRELENCIE RAVALGNGEV IDVDDLPPSL QAMAPKKNAP AVSEGYDSTD LEDIERTTIQ
RVFDQVGGDK GLALKMLGIS RATLYRKIKR YNIDISRTAR AAASGE
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