| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1776 |
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| Symbol | |
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| ID | 4072836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2151748 |
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| End bp | 2155515 |
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| Gene Length | 3768 bp |
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| Protein Length | 1255 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983784 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_590851 |
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| Protein GI | 94968803 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCTG GTACCAAGAC CAGCGAGATA TCCGGCACCT TTCGAGGCGC TCAAGAAGCC
CTGCATGAAC TTCTGCTGCA ATTTCCTGCG ACGGTAGATC CCGCAGAAGA CCTGGTCGCA
CTGGTCACGC GGTTTTGCCG TGCGGTGCGG CAGATGTTCG CCGCCTCTGG CGCTTATTGC
TGGCTGCTGG CCGAAGGGCG GGAACTGACC GGCTTCGCGG CGGATGGGCT CCAGTCGGCG
ACTTTTCCGG GAATGAAGCT CTCGCTGGAC CAGCCTTCTT TGGCGCGACA GGCGCTGGAG
ACGGGAAGGG CAGCCTTTGT AAATCAAGTG GAACGCGACC CGGCGTCGCC AGGAGCAATC
CTGGCGGTGC CGCTGATGGC AATGTCGCGT GCCACGGGCG TTCTCATCCT GACCCAGCAC
GACCGGGATC GGGAATTTGA GCACGATACG GCTTCTGCGG TTCTGGTGCT CGGTGCGCAT
TTAGGGGCGG TGATTTCGAA CGCGCGGCTA GCGCTGGCAT TGGTGGACGA GCGGCGTCGT
AACGAGACTC TGATCGAAGC AGCTGAGAGT TTCAATGTCC GGCTGGGCAC GACCGCAGTG
AAGCAGTCCA TCGCCGATCG CACCCGGCGA CTGTTGCAGG CCGAGACAGC TTTAGTCCTG
TGGTCGCATC TTGAAGGTTT TTCGCTCGAT TCCATCAGTT CGGGCTTGAT CGTTCCGGAG
CCGGTGCACG TCAGCGGATT TCTCTCGGAA CTCGCTTCCC GCGCGGTTGT GGCTCTCGAT
CCGCTTTTCG GAAAAGCGCC GGACAACGAA CCTTTATTAC GCGGACAGAT CATGGCTGCG
CCGCTCCGAA CGCACGGCGG GCGAGGCGTG ATGATCGTTT CCGGTGGATC CAAAACGTTC
TCGGCGCAGG ACGAGGTATT GCTGGCGGGA TTGGCGACCT TCGGTTCCAC CGCCCTGAGC
AATGCTGAGC TTCAGGAGAC CGCCGAGGTC CACTCTCAAG ACCTTCAGCG GCTGCTGGAC
ATTTCCTCCA GCCTGGCGCG CGGAGCGACG GTTGATCGCT TCCTCGATCA ATTCGTTTTG
CGAACTGCGG AGTTTCTCGA ATACGAGCGG GCATGGGTCA TCCTCCTCGA TGGCGGACAG
CCATATTTGC GGTGGACTGC CGACAGTGGA AGTTCACAAT CTGAGAACCA TCCTCTGACC
TCTCCGCTCA TACACCAGAT CCTACAAAAG GACGAAGCGT TCGCCAGCAA TGATGTTTCT
GCCGATCCAC TTGCAGACCG CGGTTGGGTT CAGCGTCACC AGCTTCGCCA AATCCTGACT
GCGCCGTTGC GCACCGCCGG AGGACGAGCG CTGGGGGTGC TGGCGGTCCT CGATCGTAAA
GACGGGCGGC CGATCAGCGA CTCTGACGGA GGCCGTTTGA AAGCGTTGGC AGCTGAGGCT
TCGGTCGTGA TCGAGGCTTC CGAGAACTTT GAGCGGCTCG AACAACATCG CCGCCGCGCG
GAAGATCTTG TCGGGCTTGC GCTCGCGCTG AATTCCACGT TGGAAGTTGG TGAGCTCGCG
CGAGCATTCA CGCTCAAGGC GTCCCAGATG CTTGGCGCAC CGGCAGCGGC GGCAGTCATC
GTTTCGCCCA ATGGCTTCGA CGCCATCGTA CTGCATCCGG AACGTCAAGG CGAAGACCAT
GTGCTCGCCC ATCGCTTGGC CCACGGTTTG GCTGACGTCG TGAGCGCGCA TGGTCGCGTC
GCCATTCACG GCAGCGCCGC GGAGCTGCTT GGTGACAACC TCGGCAATGC ACTGGGTTGG
ACAGACGTTG CGATTGCGCC TTTGGCGTCG GGTACAGGCG ATCTAATCGG CATGTTGTGT
CTCGCGAACC GCGGACGCGG GCTCGATGAT GTCGAAGCGC ACCTTCTGCA TGCGGTGGTC
GCGCATGCTT CCGTAGCGTT CCAAAACTCA AGGCTATTTG GTCAGATTGC CAACTCCAGC
AAGAGCTGGA GCCAGATCTT CGATGCCATT GGCGACCTCA TGATCGTTCA CGACGATCAC
AACCGCATCG TGCGGATGAA CCGCGCCGTG TCGGAACTCG TTGGGGTCCA AGCGTCGCAA
CTCACTGGCA TGGATGTTCG CGCTCTCGTA CCTCTCTGTA GTACCGACGA TTCGCCCTGT
CCGTTCTGTG CCCTCGAAAG GGAAGGGCTC AGTGAGTACG AGAACCAGGC GCTGCAGCGC
TCATATCTGG TCTCCACTTC AATGATCTCT GGCAGCACCG AGGGCCAAGT CGTTCACATC
CTGAAAGACA TTAGCGATCG TCAGGAAGCC GAGCGTCGCT ATCGCGAACT CTTCGACAAC
ATTCACGAAG GGCTCTTCTT CTCCACTCCA GAAGGCCGTT TCGTTGAAGT CAACGATGCA
TTGGTCAAGA TGCTTGGCTA TGACAGTCGT GAGGATTTGT TGCAGGTGGA CATTACCCAC
CAACTGCACA TCACGCCGGC ACATCGGGAG CGGTTCAGCA CTTTGCTGGA AGAGCACGGC
GCGATGAAAA GCTTCGAGTC CCCTCTGGTG CGCAAAGACG GCAAGATCAT CCATACGCTG
CAGAATTGTT ATGCCGTGCG GGACGCCAGC GGGCGAGTCT TCCAATATCG AGGCCTGATC
CTCGACATCA CGGAATTGAA ATCAGTGCAG ACCGACGCTC AGCGCCAGCG CGATTTCAAC
CTCAAAATCC TCAACAACAC GCAGAGCGTA ATTATCGTTG CCGACACCGC CGGGCTGATT
ACCTACGCCA ACGATCGCAG CTCCGACGCC TGCGGATATG ATCCGGAAGG CCTGGTCGGA
AAGCCGCTGT CGTTGCTGGT CTCCGCTGAA AGCCAGGAAT TGTTTGCCCG CGCGATTGAA
GCGACCAGCA ACGGCGAGCA AGTCGAAAGC CTCGATCTTC CCCTGCAATG TGCGGACGAT
CGCGTGGTGC GCTACAACGT GACTCTCAGC CCGATGCGCG ATGAAAGTGG CAACGTCACC
AGCATCATCG CCCTCATGAC CGACATCACC GACGCTTCAA TGCTGCAGGC CAAGCTGATC
CACTCCGAAA AAATGGCCGC CGTTGGCCAG CTTGTTTCTG GCGTAGCTCA TGAGGTCAAC
AATCCGCTTA CTGCGATCAT GGGCTATGCG GACTTGCTGA CATCCTCACC GGATATCCCG
CCAGATGCAC GTCGCGATCT CGGAATTATT CTTCAAGAAG CGCAGCGTAC GAAGCAGATC
GTTCAAAACC TGCTGAGCTT TGCACGGCAG TCAGTGCCGC ATCGAGAACC GGTAGATCTC
AATGCCGTCC TCGCGCGCAC GTTGCAACTG CGCCAATACG ACTTTGTAAA CCACGGCGTA
CGCGTAGAAG AAGATCTCGA TCCCAATTTG CCGCCAGTCC TGGGCGATCC CCAGCAATTG
CAGCAGGTGT TTCTCAACGT AGTGAACAAC GCGTACGATG CGGTTCGCGA GGTCGCACGT
CCGCCCGCAG TGCGAATTTC CACGGGAGCG GTGAACGGCG TTGTCGAAGT GCAGATCAGC
GATAACGGCC CAGGAATCAG CATGCCCGAC CGCATCTTCG ACCCATTCTT TACGACCAAG
GGTGTAGGCA AGGGGACCGG CCTGGGGCTC AGTATCTGCT ACGGCATCGT TCGCGAACAT
GGCGGCGAGA TCACTTGCGT GAATCATCCG GAGGGTCAGG GCGCGACCTT CTTCATACGC
CTGCCAATCT ATTTGCTGAC GCCCGAGAAG GATGAGGTGC GCGCATGA
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| Protein sequence | MAAGTKTSEI SGTFRGAQEA LHELLLQFPA TVDPAEDLVA LVTRFCRAVR QMFAASGAYC
WLLAEGRELT GFAADGLQSA TFPGMKLSLD QPSLARQALE TGRAAFVNQV ERDPASPGAI
LAVPLMAMSR ATGVLILTQH DRDREFEHDT ASAVLVLGAH LGAVISNARL ALALVDERRR
NETLIEAAES FNVRLGTTAV KQSIADRTRR LLQAETALVL WSHLEGFSLD SISSGLIVPE
PVHVSGFLSE LASRAVVALD PLFGKAPDNE PLLRGQIMAA PLRTHGGRGV MIVSGGSKTF
SAQDEVLLAG LATFGSTALS NAELQETAEV HSQDLQRLLD ISSSLARGAT VDRFLDQFVL
RTAEFLEYER AWVILLDGGQ PYLRWTADSG SSQSENHPLT SPLIHQILQK DEAFASNDVS
ADPLADRGWV QRHQLRQILT APLRTAGGRA LGVLAVLDRK DGRPISDSDG GRLKALAAEA
SVVIEASENF ERLEQHRRRA EDLVGLALAL NSTLEVGELA RAFTLKASQM LGAPAAAAVI
VSPNGFDAIV LHPERQGEDH VLAHRLAHGL ADVVSAHGRV AIHGSAAELL GDNLGNALGW
TDVAIAPLAS GTGDLIGMLC LANRGRGLDD VEAHLLHAVV AHASVAFQNS RLFGQIANSS
KSWSQIFDAI GDLMIVHDDH NRIVRMNRAV SELVGVQASQ LTGMDVRALV PLCSTDDSPC
PFCALEREGL SEYENQALQR SYLVSTSMIS GSTEGQVVHI LKDISDRQEA ERRYRELFDN
IHEGLFFSTP EGRFVEVNDA LVKMLGYDSR EDLLQVDITH QLHITPAHRE RFSTLLEEHG
AMKSFESPLV RKDGKIIHTL QNCYAVRDAS GRVFQYRGLI LDITELKSVQ TDAQRQRDFN
LKILNNTQSV IIVADTAGLI TYANDRSSDA CGYDPEGLVG KPLSLLVSAE SQELFARAIE
ATSNGEQVES LDLPLQCADD RVVRYNVTLS PMRDESGNVT SIIALMTDIT DASMLQAKLI
HSEKMAAVGQ LVSGVAHEVN NPLTAIMGYA DLLTSSPDIP PDARRDLGII LQEAQRTKQI
VQNLLSFARQ SVPHREPVDL NAVLARTLQL RQYDFVNHGV RVEEDLDPNL PPVLGDPQQL
QQVFLNVVNN AYDAVREVAR PPAVRISTGA VNGVVEVQIS DNGPGISMPD RIFDPFFTTK
GVGKGTGLGL SICYGIVREH GGEITCVNHP EGQGATFFIR LPIYLLTPEK DEVRA
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