Gene Acid345_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1776 
Symbol 
ID4072836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2151748 
End bp2155515 
Gene Length3768 bp 
Protein Length1255 aa 
Translation table11 
GC content59% 
IMG OID637983784 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_590851 
Protein GI94968803 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTG GTACCAAGAC CAGCGAGATA TCCGGCACCT TTCGAGGCGC TCAAGAAGCC 
CTGCATGAAC TTCTGCTGCA ATTTCCTGCG ACGGTAGATC CCGCAGAAGA CCTGGTCGCA
CTGGTCACGC GGTTTTGCCG TGCGGTGCGG CAGATGTTCG CCGCCTCTGG CGCTTATTGC
TGGCTGCTGG CCGAAGGGCG GGAACTGACC GGCTTCGCGG CGGATGGGCT CCAGTCGGCG
ACTTTTCCGG GAATGAAGCT CTCGCTGGAC CAGCCTTCTT TGGCGCGACA GGCGCTGGAG
ACGGGAAGGG CAGCCTTTGT AAATCAAGTG GAACGCGACC CGGCGTCGCC AGGAGCAATC
CTGGCGGTGC CGCTGATGGC AATGTCGCGT GCCACGGGCG TTCTCATCCT GACCCAGCAC
GACCGGGATC GGGAATTTGA GCACGATACG GCTTCTGCGG TTCTGGTGCT CGGTGCGCAT
TTAGGGGCGG TGATTTCGAA CGCGCGGCTA GCGCTGGCAT TGGTGGACGA GCGGCGTCGT
AACGAGACTC TGATCGAAGC AGCTGAGAGT TTCAATGTCC GGCTGGGCAC GACCGCAGTG
AAGCAGTCCA TCGCCGATCG CACCCGGCGA CTGTTGCAGG CCGAGACAGC TTTAGTCCTG
TGGTCGCATC TTGAAGGTTT TTCGCTCGAT TCCATCAGTT CGGGCTTGAT CGTTCCGGAG
CCGGTGCACG TCAGCGGATT TCTCTCGGAA CTCGCTTCCC GCGCGGTTGT GGCTCTCGAT
CCGCTTTTCG GAAAAGCGCC GGACAACGAA CCTTTATTAC GCGGACAGAT CATGGCTGCG
CCGCTCCGAA CGCACGGCGG GCGAGGCGTG ATGATCGTTT CCGGTGGATC CAAAACGTTC
TCGGCGCAGG ACGAGGTATT GCTGGCGGGA TTGGCGACCT TCGGTTCCAC CGCCCTGAGC
AATGCTGAGC TTCAGGAGAC CGCCGAGGTC CACTCTCAAG ACCTTCAGCG GCTGCTGGAC
ATTTCCTCCA GCCTGGCGCG CGGAGCGACG GTTGATCGCT TCCTCGATCA ATTCGTTTTG
CGAACTGCGG AGTTTCTCGA ATACGAGCGG GCATGGGTCA TCCTCCTCGA TGGCGGACAG
CCATATTTGC GGTGGACTGC CGACAGTGGA AGTTCACAAT CTGAGAACCA TCCTCTGACC
TCTCCGCTCA TACACCAGAT CCTACAAAAG GACGAAGCGT TCGCCAGCAA TGATGTTTCT
GCCGATCCAC TTGCAGACCG CGGTTGGGTT CAGCGTCACC AGCTTCGCCA AATCCTGACT
GCGCCGTTGC GCACCGCCGG AGGACGAGCG CTGGGGGTGC TGGCGGTCCT CGATCGTAAA
GACGGGCGGC CGATCAGCGA CTCTGACGGA GGCCGTTTGA AAGCGTTGGC AGCTGAGGCT
TCGGTCGTGA TCGAGGCTTC CGAGAACTTT GAGCGGCTCG AACAACATCG CCGCCGCGCG
GAAGATCTTG TCGGGCTTGC GCTCGCGCTG AATTCCACGT TGGAAGTTGG TGAGCTCGCG
CGAGCATTCA CGCTCAAGGC GTCCCAGATG CTTGGCGCAC CGGCAGCGGC GGCAGTCATC
GTTTCGCCCA ATGGCTTCGA CGCCATCGTA CTGCATCCGG AACGTCAAGG CGAAGACCAT
GTGCTCGCCC ATCGCTTGGC CCACGGTTTG GCTGACGTCG TGAGCGCGCA TGGTCGCGTC
GCCATTCACG GCAGCGCCGC GGAGCTGCTT GGTGACAACC TCGGCAATGC ACTGGGTTGG
ACAGACGTTG CGATTGCGCC TTTGGCGTCG GGTACAGGCG ATCTAATCGG CATGTTGTGT
CTCGCGAACC GCGGACGCGG GCTCGATGAT GTCGAAGCGC ACCTTCTGCA TGCGGTGGTC
GCGCATGCTT CCGTAGCGTT CCAAAACTCA AGGCTATTTG GTCAGATTGC CAACTCCAGC
AAGAGCTGGA GCCAGATCTT CGATGCCATT GGCGACCTCA TGATCGTTCA CGACGATCAC
AACCGCATCG TGCGGATGAA CCGCGCCGTG TCGGAACTCG TTGGGGTCCA AGCGTCGCAA
CTCACTGGCA TGGATGTTCG CGCTCTCGTA CCTCTCTGTA GTACCGACGA TTCGCCCTGT
CCGTTCTGTG CCCTCGAAAG GGAAGGGCTC AGTGAGTACG AGAACCAGGC GCTGCAGCGC
TCATATCTGG TCTCCACTTC AATGATCTCT GGCAGCACCG AGGGCCAAGT CGTTCACATC
CTGAAAGACA TTAGCGATCG TCAGGAAGCC GAGCGTCGCT ATCGCGAACT CTTCGACAAC
ATTCACGAAG GGCTCTTCTT CTCCACTCCA GAAGGCCGTT TCGTTGAAGT CAACGATGCA
TTGGTCAAGA TGCTTGGCTA TGACAGTCGT GAGGATTTGT TGCAGGTGGA CATTACCCAC
CAACTGCACA TCACGCCGGC ACATCGGGAG CGGTTCAGCA CTTTGCTGGA AGAGCACGGC
GCGATGAAAA GCTTCGAGTC CCCTCTGGTG CGCAAAGACG GCAAGATCAT CCATACGCTG
CAGAATTGTT ATGCCGTGCG GGACGCCAGC GGGCGAGTCT TCCAATATCG AGGCCTGATC
CTCGACATCA CGGAATTGAA ATCAGTGCAG ACCGACGCTC AGCGCCAGCG CGATTTCAAC
CTCAAAATCC TCAACAACAC GCAGAGCGTA ATTATCGTTG CCGACACCGC CGGGCTGATT
ACCTACGCCA ACGATCGCAG CTCCGACGCC TGCGGATATG ATCCGGAAGG CCTGGTCGGA
AAGCCGCTGT CGTTGCTGGT CTCCGCTGAA AGCCAGGAAT TGTTTGCCCG CGCGATTGAA
GCGACCAGCA ACGGCGAGCA AGTCGAAAGC CTCGATCTTC CCCTGCAATG TGCGGACGAT
CGCGTGGTGC GCTACAACGT GACTCTCAGC CCGATGCGCG ATGAAAGTGG CAACGTCACC
AGCATCATCG CCCTCATGAC CGACATCACC GACGCTTCAA TGCTGCAGGC CAAGCTGATC
CACTCCGAAA AAATGGCCGC CGTTGGCCAG CTTGTTTCTG GCGTAGCTCA TGAGGTCAAC
AATCCGCTTA CTGCGATCAT GGGCTATGCG GACTTGCTGA CATCCTCACC GGATATCCCG
CCAGATGCAC GTCGCGATCT CGGAATTATT CTTCAAGAAG CGCAGCGTAC GAAGCAGATC
GTTCAAAACC TGCTGAGCTT TGCACGGCAG TCAGTGCCGC ATCGAGAACC GGTAGATCTC
AATGCCGTCC TCGCGCGCAC GTTGCAACTG CGCCAATACG ACTTTGTAAA CCACGGCGTA
CGCGTAGAAG AAGATCTCGA TCCCAATTTG CCGCCAGTCC TGGGCGATCC CCAGCAATTG
CAGCAGGTGT TTCTCAACGT AGTGAACAAC GCGTACGATG CGGTTCGCGA GGTCGCACGT
CCGCCCGCAG TGCGAATTTC CACGGGAGCG GTGAACGGCG TTGTCGAAGT GCAGATCAGC
GATAACGGCC CAGGAATCAG CATGCCCGAC CGCATCTTCG ACCCATTCTT TACGACCAAG
GGTGTAGGCA AGGGGACCGG CCTGGGGCTC AGTATCTGCT ACGGCATCGT TCGCGAACAT
GGCGGCGAGA TCACTTGCGT GAATCATCCG GAGGGTCAGG GCGCGACCTT CTTCATACGC
CTGCCAATCT ATTTGCTGAC GCCCGAGAAG GATGAGGTGC GCGCATGA
 
Protein sequence
MAAGTKTSEI SGTFRGAQEA LHELLLQFPA TVDPAEDLVA LVTRFCRAVR QMFAASGAYC 
WLLAEGRELT GFAADGLQSA TFPGMKLSLD QPSLARQALE TGRAAFVNQV ERDPASPGAI
LAVPLMAMSR ATGVLILTQH DRDREFEHDT ASAVLVLGAH LGAVISNARL ALALVDERRR
NETLIEAAES FNVRLGTTAV KQSIADRTRR LLQAETALVL WSHLEGFSLD SISSGLIVPE
PVHVSGFLSE LASRAVVALD PLFGKAPDNE PLLRGQIMAA PLRTHGGRGV MIVSGGSKTF
SAQDEVLLAG LATFGSTALS NAELQETAEV HSQDLQRLLD ISSSLARGAT VDRFLDQFVL
RTAEFLEYER AWVILLDGGQ PYLRWTADSG SSQSENHPLT SPLIHQILQK DEAFASNDVS
ADPLADRGWV QRHQLRQILT APLRTAGGRA LGVLAVLDRK DGRPISDSDG GRLKALAAEA
SVVIEASENF ERLEQHRRRA EDLVGLALAL NSTLEVGELA RAFTLKASQM LGAPAAAAVI
VSPNGFDAIV LHPERQGEDH VLAHRLAHGL ADVVSAHGRV AIHGSAAELL GDNLGNALGW
TDVAIAPLAS GTGDLIGMLC LANRGRGLDD VEAHLLHAVV AHASVAFQNS RLFGQIANSS
KSWSQIFDAI GDLMIVHDDH NRIVRMNRAV SELVGVQASQ LTGMDVRALV PLCSTDDSPC
PFCALEREGL SEYENQALQR SYLVSTSMIS GSTEGQVVHI LKDISDRQEA ERRYRELFDN
IHEGLFFSTP EGRFVEVNDA LVKMLGYDSR EDLLQVDITH QLHITPAHRE RFSTLLEEHG
AMKSFESPLV RKDGKIIHTL QNCYAVRDAS GRVFQYRGLI LDITELKSVQ TDAQRQRDFN
LKILNNTQSV IIVADTAGLI TYANDRSSDA CGYDPEGLVG KPLSLLVSAE SQELFARAIE
ATSNGEQVES LDLPLQCADD RVVRYNVTLS PMRDESGNVT SIIALMTDIT DASMLQAKLI
HSEKMAAVGQ LVSGVAHEVN NPLTAIMGYA DLLTSSPDIP PDARRDLGII LQEAQRTKQI
VQNLLSFARQ SVPHREPVDL NAVLARTLQL RQYDFVNHGV RVEEDLDPNL PPVLGDPQQL
QQVFLNVVNN AYDAVREVAR PPAVRISTGA VNGVVEVQIS DNGPGISMPD RIFDPFFTTK
GVGKGTGLGL SICYGIVREH GGEITCVNHP EGQGATFFIR LPIYLLTPEK DEVRA