Gene Acid345_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1771 
Symbol 
ID4072831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2145208 
End bp2147391 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content60% 
IMG OID637983779 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_590846 
Protein GI94968798 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTTCT TCTCCGACGA GCGGGCAGCC GAACTCCGGG ACTTGTTCTT CGAGAGCGCG 
CAAGAACTTC TGCAAGCGCT CAACGACGAA GGTCTTGAGT TGGAGCGCCA CCCCAACGAC
GCGGAGATCG TGCGCGACAT CCGTCGCACC GTGCACACGC TCAAGGGCGA CTCGGCGGCC
TGCGGCTTTA AAGAACTCAG CGAACTGGCA CACGAACTCG AAAACGCTCT TACTCCCGAA
ATCACGCACG CGGCGAGCGG CAACCTCGTC GAACTCGTGC TGAACGCTGC CGACACCTTC
GATTCCCTGC TCACCGCATA TCAGCGCAAT TCAGCGCTCC CGGCCACCGA TCACGTCCGC
AACCTGATTA AGCGGTTGAC CGAGAAGCCG CAAGCACTCG ACGGCGGCGC GCTAAAGCTT
GAGTTCATGT GGAGCGAGTA CGAACAATTA CTCGCTGAGA AGGGCGCATC GTCTGGCGCA
CGTCTGTTTA ACATCGCGAT TGAAGTGGAC CCGCAGTGCC CCATGCGCAT GGCCGCTCTG
CAACTCGTTA AGAACGTGCT GCAGGGGCTC GGCGTCACCA TCACGATTCA GCCGGAAGGC
GACATGCTGC CGGAAAACAT CTCGACGATT CGGGCCATCC TTGCGACCTT CCAGGCGCCC
GAGAACATCG AGAAGAAGAT CCAGATTCCG GCGATTACGC GCCGCACTTT GCTCGAAGAC
TATCTGCGCC CCGGACAACC GCGCGAAGGC ATTCTCTCGC GCGCGACCGA AGCACCGAAA
GAAACTCCTA AGGCCGTCGC TCCGCCGCCC AAGCCCGCGC CGCCGGCGCC TGAGCCGAAG
AAAGTCGAGC CGCCCAAGCC CGATCTCAAA ACCGTACCCG CTCTGCTCAC CGTCGAAGAG
CACGACGGCG ATGCGCACGC CGATGCGCCG TCGCCTAATC CCTTTGCGAT CACGCCTGAG
AACCTGCTGC GCGTGGATGC CGATCGCATT GATACCGTAC TCAATCTCGT CGGTGAGTTG
ATCATCAACA AGTCGATGCT CAACCAGACG CTCTCCGATT TCGGCAAGCA GCACGCGAAA
GATCCGTTGA AGGCCCGCTT TGCCGACGCG ATGGCGTTCC AGGCGCAGAT CCTGAATGAG
CTCCAGCGCG CGGTGATGAA GATCCGCATG GTGCCGGTGG AGCAACTCTT CCGGCGCTTT
CCTCGCATTG TTCGCGATGT CGCTCGCTCC AGTGGCAAGG AATGCGATCT GATCATCAGC
GGCCAGAACA CCGATCTCGA TAAGAGCATT CTCGACGCGC TCTCTGAGCC GATGATGCAT
CTAATTCGCA ACGCCGTGGA CCACGGCATC GAGCTTCCAG CCGCGCGTAT CGCCGCCGGC
AAGTCGGTCA AAGGAACACT GAAACTCAAT GCGTTCTACC AGGGCAACCA GGTCGTCATC
GAACTCACCG ACGACGGTGC CGGCATTGAC CGCGATCGCG TGGTTGAAAA AGCAATCGAG
AACAACATCG TCTCGGAGAA AGAAGCCGAA AAGCTGACCG ATCAGGACGC GCTGAACCTG
ATCTTCCGAC CCGGCCTGAG CACCGCGACC CAAGTCACTG AGATCTCCGG CCGCGGTATG
GGCATGGACA TCGTAGAGAG CGTGCTGCGT CGCCTGAAGG GCTCCATCGG GATCCAGACT
GAAAAAGGGC GCGGAACGAC TTTCCAGTTG CGCGTTCCGC TGACTCTGGC GATCATGCAG
GCACTGCTCT TCCGCGCAGC CAACCGGCTG TATGCGGTGC CCCTCGGCTC GGTGGTCGAG
ATAGCTCGCG CCACCTCGCA GCATATCCAC GTCGTGGACC ACCACGAGGT GTTGCAGCTT
CGCGAACAGA TCGTCACTCT GGTTCGTCTG GACAAGCTGG AGGGCCGCAA GCGCCAGCCG
CAGTCGGAGA AGCACAAGGT TTTCGTAGTC GTAGTACAAC TGGGCGACCG CCGCTTTGGG
ATGGTCGTAG ACAAACTGGT TGGGGAAGAA GAACTGGTCA TCAAGGCCCT GGACGACAAT
CTCGTCGCAA CCGATTTGGT TAGCGGCGCT TCCATCCTTG GTGACGGTAA GGTCGTTTTG
ATCCTAAACG TTGCTTCTGT GGTCGAGCGC CTTGGGCGCG CGCCGAGCGG CAACGGGTCA
AGAAAATTGG GAGCCTCGGC TTGA
 
Protein sequence
MSFFSDERAA ELRDLFFESA QELLQALNDE GLELERHPND AEIVRDIRRT VHTLKGDSAA 
CGFKELSELA HELENALTPE ITHAASGNLV ELVLNAADTF DSLLTAYQRN SALPATDHVR
NLIKRLTEKP QALDGGALKL EFMWSEYEQL LAEKGASSGA RLFNIAIEVD PQCPMRMAAL
QLVKNVLQGL GVTITIQPEG DMLPENISTI RAILATFQAP ENIEKKIQIP AITRRTLLED
YLRPGQPREG ILSRATEAPK ETPKAVAPPP KPAPPAPEPK KVEPPKPDLK TVPALLTVEE
HDGDAHADAP SPNPFAITPE NLLRVDADRI DTVLNLVGEL IINKSMLNQT LSDFGKQHAK
DPLKARFADA MAFQAQILNE LQRAVMKIRM VPVEQLFRRF PRIVRDVARS SGKECDLIIS
GQNTDLDKSI LDALSEPMMH LIRNAVDHGI ELPAARIAAG KSVKGTLKLN AFYQGNQVVI
ELTDDGAGID RDRVVEKAIE NNIVSEKEAE KLTDQDALNL IFRPGLSTAT QVTEISGRGM
GMDIVESVLR RLKGSIGIQT EKGRGTTFQL RVPLTLAIMQ ALLFRAANRL YAVPLGSVVE
IARATSQHIH VVDHHEVLQL REQIVTLVRL DKLEGRKRQP QSEKHKVFVV VVQLGDRRFG
MVVDKLVGEE ELVIKALDDN LVATDLVSGA SILGDGKVVL ILNVASVVER LGRAPSGNGS
RKLGASA