Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1741 |
Symbol | |
ID | 4072008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2113594 |
End bp | 2114580 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983749 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_590816 |
Protein GI | 94968768 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAGCTT TCGTTACAGG GGCGACCGGA TTCGTAGGCA GTCATGTGGC CGAGCTGTTA GAGGCCATGG GTGCCGAGGT TCGTGTGCTT ACGCGCAAGA CGAGCCGTAG CGAGAACCTC GAGATGCTGA AGGCCGAGCG TATCGTCGGC GATCTGCGGG ATTTCGACTC GCTGAAGAAA GGCATGGCTG GCTGCGAGGT CGTATTTCAT GTCGCGGCCG ATTACCGGCT CTGGACGCGC AATCCGGAAG AGATGTACGC CTCGAACGTT GAGGGGACTC GATCAATCAT CCGCGCCGCG CAGGAGACCG GAGTTCGGCG AGTGGTCTAT ACCTCGAGCG TGGCGACCAT GGGATTCGGC TACAACGGTT ACATCGTCAA TGAAGCGACC CCCGTGCATG CTGGAATGAT GATCGGCCAC TACAAGAAGT CGAAGTTCCA GGCCGAGCAG GTGGCGCTGG AAATGGCACA GGCCGGAGCG GATGTGGTGA TTGTGAACCC GAGCACGCCG ATCGGAGAGC GCGACATCAA GCCGACACCG ACTGGCCAGA TCGTTGTGGA CTTTTTGAAG AAGAAATTCC CCGCTTACGT GGATACGGGC CTGAATCTGG TGGATGTCCG CGAGTGCGCG CAGGGTCACA TCAACGCGAT GGAGCGCGGA CGCAGTGGGG AACGATACAT TCTCGGGGGC GAGAACCTGA CGTTGAAGCA GATTCTCGAC AAGCTTGCTT CGATCTCGGG ACTGCCCTCA CCGAAGGTAA AGTTACCTTA TGCTGTTGCG CTCGCGGCCG GCGCGGTGGA TACCGTTGTT ACCGGCTACA TCCGCGGGAA AGAGCCGCGA GCGAATCTTG ACGCTGTGCG CATGGGCAGG AAGAAAATGT ATGTCTCCTC TGCTAAGGCG GAGGCGGATC TTGGTTACAA GGCAGGGTCT GCGAACGACG GGCTACGCCG CGCGGCGGAA TGGTTTCGCG CCCATGGGTA CGCATAA
|
Protein sequence | MKAFVTGATG FVGSHVAELL EAMGAEVRVL TRKTSRSENL EMLKAERIVG DLRDFDSLKK GMAGCEVVFH VAADYRLWTR NPEEMYASNV EGTRSIIRAA QETGVRRVVY TSSVATMGFG YNGYIVNEAT PVHAGMMIGH YKKSKFQAEQ VALEMAQAGA DVVIVNPSTP IGERDIKPTP TGQIVVDFLK KKFPAYVDTG LNLVDVRECA QGHINAMERG RSGERYILGG ENLTLKQILD KLASISGLPS PKVKLPYAVA LAAGAVDTVV TGYIRGKEPR ANLDAVRMGR KKMYVSSAKA EADLGYKAGS ANDGLRRAAE WFRAHGYA
|
| |