Gene Acid345_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1741 
Symbol 
ID4072008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2113594 
End bp2114580 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content59% 
IMG OID637983749 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_590816 
Protein GI94968768 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR03466] hopanoid-associated sugar epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGCTT TCGTTACAGG GGCGACCGGA TTCGTAGGCA GTCATGTGGC CGAGCTGTTA 
GAGGCCATGG GTGCCGAGGT TCGTGTGCTT ACGCGCAAGA CGAGCCGTAG CGAGAACCTC
GAGATGCTGA AGGCCGAGCG TATCGTCGGC GATCTGCGGG ATTTCGACTC GCTGAAGAAA
GGCATGGCTG GCTGCGAGGT CGTATTTCAT GTCGCGGCCG ATTACCGGCT CTGGACGCGC
AATCCGGAAG AGATGTACGC CTCGAACGTT GAGGGGACTC GATCAATCAT CCGCGCCGCG
CAGGAGACCG GAGTTCGGCG AGTGGTCTAT ACCTCGAGCG TGGCGACCAT GGGATTCGGC
TACAACGGTT ACATCGTCAA TGAAGCGACC CCCGTGCATG CTGGAATGAT GATCGGCCAC
TACAAGAAGT CGAAGTTCCA GGCCGAGCAG GTGGCGCTGG AAATGGCACA GGCCGGAGCG
GATGTGGTGA TTGTGAACCC GAGCACGCCG ATCGGAGAGC GCGACATCAA GCCGACACCG
ACTGGCCAGA TCGTTGTGGA CTTTTTGAAG AAGAAATTCC CCGCTTACGT GGATACGGGC
CTGAATCTGG TGGATGTCCG CGAGTGCGCG CAGGGTCACA TCAACGCGAT GGAGCGCGGA
CGCAGTGGGG AACGATACAT TCTCGGGGGC GAGAACCTGA CGTTGAAGCA GATTCTCGAC
AAGCTTGCTT CGATCTCGGG ACTGCCCTCA CCGAAGGTAA AGTTACCTTA TGCTGTTGCG
CTCGCGGCCG GCGCGGTGGA TACCGTTGTT ACCGGCTACA TCCGCGGGAA AGAGCCGCGA
GCGAATCTTG ACGCTGTGCG CATGGGCAGG AAGAAAATGT ATGTCTCCTC TGCTAAGGCG
GAGGCGGATC TTGGTTACAA GGCAGGGTCT GCGAACGACG GGCTACGCCG CGCGGCGGAA
TGGTTTCGCG CCCATGGGTA CGCATAA
 
Protein sequence
MKAFVTGATG FVGSHVAELL EAMGAEVRVL TRKTSRSENL EMLKAERIVG DLRDFDSLKK 
GMAGCEVVFH VAADYRLWTR NPEEMYASNV EGTRSIIRAA QETGVRRVVY TSSVATMGFG
YNGYIVNEAT PVHAGMMIGH YKKSKFQAEQ VALEMAQAGA DVVIVNPSTP IGERDIKPTP
TGQIVVDFLK KKFPAYVDTG LNLVDVRECA QGHINAMERG RSGERYILGG ENLTLKQILD
KLASISGLPS PKVKLPYAVA LAAGAVDTVV TGYIRGKEPR ANLDAVRMGR KKMYVSSAKA
EADLGYKAGS ANDGLRRAAE WFRAHGYA