| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1734 |
|---|
| Symbol | |
|---|
| ID | 4072001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2103773 |
|---|
| End bp | 2105158 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637983742 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_590809 |
|---|
| Protein GI | 94968761 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.473605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGA AAGCTGAAAT CCTGATTGTG GACGACGAGG CGAACACACT GGCCTCCTTA
TCGCGCGCGT TTCGTCTGGC CGGTCATGAG GCAACGGTGT GTGACAACGC TGTGCGAGCA
CTGGAGATTG CGAAATCCAA GCCGTTCGAT TTGATCTTGA GTGATGTGGT GATGCCCGGG
CGCGATGGTC TTACGTTGCT GGAAGATTTG AAGACTGCGG GTGTGCAAGC GCCGGTGGTG
ATGATGTCTG GCCAGGCGCA CATCGAGATG GCGGTGAAGG CGACGCGACT TGGTGCATTG
GATTTCCTGG AGAAGCCGCT TTCGACCGAC AAGCTACTGC TGACAGTCGA AAATGCACTG
AAACTCAAGC GGCTTGAGAC GGAAAACCGC GATCTTCGTA GTCGCGTGGG CAAACACGAG
ATTGTTTGGA AGGGCGAGGC GATGCGCCGG GTTATGGCGC AGATTGATCG CGTCGCGGCC
AGCGAAGCTC GCGTATGCAT CTACGGCGAG ACGGGTACTG GAAAAGAGCT TGCAGCGCGG
ACGCTTCACG AGAAGAGTCC GCGCAAGGCC GGGCCGTTCA TCACGCTGAA TTGCGCGGCG
GTGCCCGCGG AACTGATCGA GTCAGAGTTG TTCGGCCACG AAAAGGGATC CTTCACCGGT
GCAGCGCAGC GGCATATCGG CAAGTTTGAG CAGGCGCATC GCGGAACTCT GTTTCTTGAT
GAAATTGGCG ACATGCCGCT AGCGATGCAG GCGAAGCTTC TGCGCGTGCT GGAAGAGGGT
GAGGTCGAGC GCGTCGGCGG AGATAAATCG ATACCTGTCG ATGTGCGCGT TATCGTTGCG
ACCCACCGTA ACCTTGAAGA CCTGGTGAAA GAAGGGAAGT TTCGGCAGGA CCTGTTCCAT
CGCGTGTATG TGTTTCCGCT GATCCTTCCG CCACTGCGGA CGCGCCGCGA AGACATTCCT
GTGCTACTTG AACACTTTGC CGCGCAGGTG TGTTTGCAGA ATGGCTGGAA GCCGGTGCCG
TTTACGGCAG AAGCCGTCGA GGCCCTGCAG CGATATTCGT GGCCGGGCAA CGTGCGCGAG
ATGCGCAACG TTGTGGAGCG ACTGCTGCTG CTGGCGGTGG CGGGAGAAGT TGACCGCGCC
ACTGTTGAGT TGGCACTACC CGAAGCTCAG ACCGCCACTA GCGATACGGG CAGTGGGCCG
CTGTCGTCCC GTGTGGCGCA GTATGAGCGC GAGGTGATTC TGGCGGAGTT GCAGCGGCAG
AAGCATCACA TCACCAACAC GGCGAAGGCC CTCGGTCTTG AGCGCAGCCA TCTTTATAAG
AAATGCCAGG CGTTGGGGAT TGATTTGCGA GCGGTGCGCG GAACGGCGCC CGGCGCGGTC
CGCTAA
|
|---|
| Protein sequence | MTAKAEILIV DDEANTLASL SRAFRLAGHE ATVCDNAVRA LEIAKSKPFD LILSDVVMPG
RDGLTLLEDL KTAGVQAPVV MMSGQAHIEM AVKATRLGAL DFLEKPLSTD KLLLTVENAL
KLKRLETENR DLRSRVGKHE IVWKGEAMRR VMAQIDRVAA SEARVCIYGE TGTGKELAAR
TLHEKSPRKA GPFITLNCAA VPAELIESEL FGHEKGSFTG AAQRHIGKFE QAHRGTLFLD
EIGDMPLAMQ AKLLRVLEEG EVERVGGDKS IPVDVRVIVA THRNLEDLVK EGKFRQDLFH
RVYVFPLILP PLRTRREDIP VLLEHFAAQV CLQNGWKPVP FTAEAVEALQ RYSWPGNVRE
MRNVVERLLL LAVAGEVDRA TVELALPEAQ TATSDTGSGP LSSRVAQYER EVILAELQRQ
KHHITNTAKA LGLERSHLYK KCQALGIDLR AVRGTAPGAV R
|
|---|
| |