Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1718 |
Symbol | |
ID | 4072063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2085882 |
End bp | 2086568 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983726 |
Product | TetR family transcriptional regulator |
Protein accession | YP_590793 |
Protein GI | 94968745 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.114077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACGA AAGCCAAAGT GAAGACGAAG GTGGGGCGAC CGGCAGCAAG GCTGGGGCTT GGCGCCCGAG AACTTCTGCT GAATGCGGCG ACAGAGCTCT TCGCGGAATC GGGGGCAGGC GCGACGACGT TTGCCATGAT CGCAAAGCGC GCAGGGTTGA CGCCGGCAAT GCTGCACTAC TACTTCAAAG ATCGCGATGA GTTATTCGAT GCGGTGGTTG AGGAGCGCCT TTTACCGCTC ATTCGAAATG TGTGGGGGCC GGTGCATGCG GGCGAAGACG CGGCGCAGAT CGTAGAAGGG GTCGTCGGAC GGTTGCTGGA GGGCGTGGAG AAGGCACCGT GGCTACCCTC CACATGGATG AGGGAGATTT TGAATGAAGG TGGCGCGCTT CGGGAACGGA TTCTCGAGCG GTTGCCATAC GAGAAGCTGC GGATCCTGGG GAACGCTATT GCACGCGGGC AAAAGGACGG ATTGCTGAAC CCGGCGATCG TGCCGCTGCT GGCGGTGCCA TCGACGATTG GGTTGGCGAT GCTGCATATG GCGACGGCGA ATACATGGGC TGCGATTCTC CACCAGGCAC CGCTCAGCCG GGAAGCGATG AGGAAACACA TCACCGGGTT GTTGTTAGAT GGGCTCTGCC ATAAGGGCAG AGCCTCGGCC AAAACTATTT CACGAGAGAA AAAATGA
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Protein sequence | MHTKAKVKTK VGRPAARLGL GARELLLNAA TELFAESGAG ATTFAMIAKR AGLTPAMLHY YFKDRDELFD AVVEERLLPL IRNVWGPVHA GEDAAQIVEG VVGRLLEGVE KAPWLPSTWM REILNEGGAL RERILERLPY EKLRILGNAI ARGQKDGLLN PAIVPLLAVP STIGLAMLHM ATANTWAAIL HQAPLSREAM RKHITGLLLD GLCHKGRASA KTISREKK
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