Gene Acid345_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1706 
Symbol 
ID4070489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2070716 
End bp2070964 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content58% 
IMG OID637983714 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_590781 
Protein GI94968733 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.296554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGG CCGTGCCGGG AAAAATCGAG AGCATCACCG GCGAGCGCGA ACTGCGCAGC 
GGCGTCGTCA ACTTCGGCGG CGTCCAAAAA GAAATCAACC TGGCCTTCGT TCCAGAGGCC
AAAATCGCGG ACTTCGTGAT GGTCCACGTC GGCTTCGCCA TCAGCGTCGT TGACGAAGCC
GAAGCCACAA CTGTGCTCGG CTACTTGCAA CAAATGGGTG AACTCGGCGA ACTCGAGGAG
CTCAAATGA
 
Protein sequence
MCLAVPGKIE SITGERELRS GVVNFGGVQK EINLAFVPEA KIADFVMVHV GFAISVVDEA 
EATTVLGYLQ QMGELGELEE LK