| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1705 |
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| Symbol | |
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| ID | 4070488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2069604 |
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| End bp | 2070719 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637983713 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_590780 |
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| Protein GI | 94968732 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.340264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG TCGATGAGTA CCGCGACCGC GAAAAAGCTG AGCAATACGC ACGCGCCATT
CGAACCGAAG CCACGCGCCC CTGGTCCATC ATGGAAGTCT GCGGCGGTCA GACCCACACC
ATCGTCAAGT ACGCGATTGA CGAAATCCTG CGCGACAAGA TCACGCTCCT CCATGGTCCC
GGCTGCCCAG TGTGCGTCAC GCCACTCGAG TTGATCGACA AAGCTTGCGA GATTGCGACG
CGGCCCGACG TCATCTTTTG TTCGTATGGC GACATGCTTC GAGTGCCCGG ATCGCACACA
GATTTGTTCA CCGTGAAAGC CAGGGGCGGC GATGTGCGCA TCGTGTACTC GCCGATGAAC
GCACTAGAGC TTGCGAAAGC GAACCCAACG AAGCAGGTTG TCTTCTTCGC GGTTGGCTTC
GAAACCACCG CGCCCGCCAA TGCCATGGCC GTATTCCAAG CCAAGCAGCA AGGCATCTCG
AACTTCTCGG TGCTCGTCTC GCACGTGCTT GTGCCGCCCG CGATTGAGGC CGTGCTGAGC
GCACCCGACA ACCGCACGCA AGCGTTTCTG GCTGCCGGAC ACGTCTGCAC TGTGATGGGA
TATGAAGAGT ACCGGCCGCT ATCAGAGAAA TATCGCGTGC CGATCGTCGT CACCGGCTTT
GAGCCACTCG ACATTCTCCA GGGCGTGTTG ATGTGCGTAC GGCAGCTTGA GAACGGTCGC
GCTGAGGTTG AGAACCAGTA CGCGCGCTCG GTGCGCGAGT TTGGCAATGT TCCGGCGCAG
GATCTCATCG GCCAGGTCTT TCGTGTGATT CCGCGCAAGT GGCGCGGCGT TGGCGAGATC
CCGCAGAGCG GCTTCGGTCT CGCAGCGGAG TTCGCCGAAT ACGACGCGGA GTTGCGCTTC
GGTGTCGCGG ACCTCACGGT AGAAGAGGAC CGCGAGTGCA TCGCCGGAGA GGTTTTGCGT
GGTGTGAAGA AGCCGCAGGA GTGTCCGGCG TTCGGCGGGC GCTGCACGCC AGATCATCCA
CTGGGAGCGA CAATGGTCTC GAATGAAGGC GCCTGTGCTG CGTACTACCA ATACCGGCGG
CACGAAGCTA AGGCCGCGGT CGGGAGCGAA CGATGA
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| Protein sequence | MKFVDEYRDR EKAEQYARAI RTEATRPWSI MEVCGGQTHT IVKYAIDEIL RDKITLLHGP
GCPVCVTPLE LIDKACEIAT RPDVIFCSYG DMLRVPGSHT DLFTVKARGG DVRIVYSPMN
ALELAKANPT KQVVFFAVGF ETTAPANAMA VFQAKQQGIS NFSVLVSHVL VPPAIEAVLS
APDNRTQAFL AAGHVCTVMG YEEYRPLSEK YRVPIVVTGF EPLDILQGVL MCVRQLENGR
AEVENQYARS VREFGNVPAQ DLIGQVFRVI PRKWRGVGEI PQSGFGLAAE FAEYDAELRF
GVADLTVEED RECIAGEVLR GVKKPQECPA FGGRCTPDHP LGATMVSNEG ACAAYYQYRR
HEAKAAVGSE R
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