| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1700 |
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| Symbol | |
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| ID | 4070483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2063208 |
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| End bp | 2064461 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637983708 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_590775 |
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| Protein GI | 94968727 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.696744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.370784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTA CTCGCAAGCG CGCGTTGCTC CTGCTCGGAG CGGCGTCACT GTGCGCTGCA
ATTGCTTTTA CCTCATCCTC CTGTAGCTCC CATTCATCTT CGGTGGCGAG CGCCTCTAGT
CCGCCGCGGG CCACGGTAGC GATCGCGAAG AAACAGCCGA TCGGAAATTC GATCTCGGTC
GCAGGTGAAT TTCTCCCGTA CCAGGAAGTG GAAATCCACG CAAAAGTGGC TGGGTACATT
CGGCACATAG GCGTGGATAT CGGGGACCGG GTACATACCG GGCAGGAGCT TGCGGTGCTC
GAAGTGCCAG AGCTGACGGC GCAAGTCGAA GGTGCGAATG CCGGCATCAA ACGCAGCCAG
CAGGAAATCA CACGGACAAA GCACCAGGAA GCGCAGGCTG AGGCCGATCA CCAAGCGCTG
CATGCTGCAG CCATTCGACT GAAACAGGCG TCAGAGGCGC GACCGGGGCT GATTGCGGAG
CAGGAGTTGG ATGACGCGAA TGCCAAGGAC CGCGCGTCGG AAGCGCAGGT CGAGGCGGCG
AAGGCTGCAG TAGCGGCCTC GGAACAGGGA TTGGATGTAT CGCGTGCGTC GAAGAGCCAG
GTCTCTGCGA TGTCGGATTA CTCACGCATC ACGGCCCCAT TCGACGGCGT GGTTACGTGG
CGGTACTCCG ATACCGGGGC ACTGGTACAG GCAGGAACAT CAAGCAGTAG CGCCCAGCCT
GTCGTGAAGC TGGCCGAGGT AAGGACGCTC CGGTTGCGGA TCCCAGTGCC GGAATCCGTG
GTTCCGTCGA TTCACCAAGG ACAAACGGCC GACGTGGTGG TATCCGCGAC CAGTGAGCAC
TTCACCGGCA GAGTGGCGCG ATATACGGAC TCGCTGGACA GAGCGACGCG CACTATGCAG
GTCGAAATTG ACGTGCCAAA TCCGCAATAC AAGCTTTCGT CCGGCATGTA TGCCCAAGTC
ACGCTACATA CGGACCAGAT CGCCGATGCG CTTAGCATCC CGGTGTTGGC TGTGCATCGT
TCTGGAGACA AAGCAAGCGT CCTGGTGGTG AATTCCAGCG ATCGGATCGA GGAGCGCGCG
ATCGCTATAG GTATCGAGGA ACCAAATTTC GTGCAGGTGC TCACGGGACT AAAAGAGGGT
GAGCGCGTTG TTGTGGGGAA CGCGAGCGCG TACCAGGTCG GCGAATTGGT AAGTCCGAAA
GAGAGCAGCG TTGCGACGGT GCTTACCTCC AGCACGCAAG GGGGTAGCGA GTAA
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| Protein sequence | MQPTRKRALL LLGAASLCAA IAFTSSSCSS HSSSVASASS PPRATVAIAK KQPIGNSISV
AGEFLPYQEV EIHAKVAGYI RHIGVDIGDR VHTGQELAVL EVPELTAQVE GANAGIKRSQ
QEITRTKHQE AQAEADHQAL HAAAIRLKQA SEARPGLIAE QELDDANAKD RASEAQVEAA
KAAVAASEQG LDVSRASKSQ VSAMSDYSRI TAPFDGVVTW RYSDTGALVQ AGTSSSSAQP
VVKLAEVRTL RLRIPVPESV VPSIHQGQTA DVVVSATSEH FTGRVARYTD SLDRATRTMQ
VEIDVPNPQY KLSSGMYAQV TLHTDQIADA LSIPVLAVHR SGDKASVLVV NSSDRIEERA
IAIGIEEPNF VQVLTGLKEG ERVVVGNASA YQVGELVSPK ESSVATVLTS STQGGSE
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