Gene Acid345_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1698 
Symbol 
ID4070481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2058776 
End bp2060077 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content58% 
IMG OID637983706 
Productouter membrane efflux protein 
Protein accessionYP_590773 
Protein GI94968725 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.572085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0641673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATGA AAGCCCTCTC GTCCCTACTA CTACTTGGTT CTCTTTCGTT CGGACAAACA 
GGTCAGACGA ATTCCACCGC ACCCTCGTCG ATAAAATTAA CGGTTGCGGA TGCGGAACAA
ATGGCGCTGA AGAACAATCC GCAAATCTCA ATTGCGAAAT TGCTCGCACT GGCGCAACGC
CAGGTCACAC GAGAGGTACG GTCGAACGCG ATGCCGACGG CAACCCTCAA CGTGACGGCC
GTTGATTCGC ATGAGGGCAG CCGGATTACC GCAGGCGGGT TGAACAATCC AGTCATCTAC
GAGCGTGCAG CGGCGGGTGT AAACCTAAGC CAGTTGATTT ACGACTTCGG ACGTATGCAC
AACCTCGTCG CGAGCGCGAA ATATCGCGAG GAGGCGGAGG TCGCCTCCCA ACAGGCAACG
ACCGCCGACA TAACTTTCGC AGTGGATCGC GCGTTCTACA ACGCGCTCGA TGCCCAGTCC
ACGCTCGACG TAGCCAAAGA AACGGTGTCG GCACGCCAGG CAACGGCGGA CCAGATCCAG
GCGCTCACGA ACGCGAAACT CAAATCGCAA CTTGACCTCA GTTTTGCAAA CGTTAATTTG
GCGCAGGCAA AGCTTCTGCT GCTCGACGCC GAAAATCGGC AAGCAGCTTC TTTTGCCAAC
CTCAACAATC TGCTGGGCTT TGAGAAGCAA CAGCCGTATC TGCTGGTTGA CGAACTTGCA
ACCCCGCCCG CACCGGCGAC GAACGCGGAA GATCTCACTG CCGCGGCCTT TCAGTCCCGA
CCGGATTTGA TCGCTCTTAA CGATCGTTAT CAGGCAGCGG AGCGTTTCCG CCGTGCGGAA
CATGATTTGA ATCGCCCTAC CATCTCCGCG CTGGCGGCAT TCGGCGATAC TCCTGTCCGC
GCCGATCAAC TCACGCCGTG GTATGGAGCA GCTGGGGTAA ACCTGAGCCT GCCGGTATTC
AACGGATTTC TCTACTCGGC GCGCGCGAAG CAAGCCGATT TCGAAGCCAA AGCCGCGCAG
GAGCAAGTCC GCGACTTGCG TGATCGCATC GCGAGGGATG TCCAGACCAC GTGGTTGCAG
TCAACGACCT CGTACCAGCG CATGGCGGTG GCGCAACAGT TGGTGCAGCA GGCAAACCTT
GCCTTAGACC TCGCGCAGAC TCGCTACAAG CTCGGACTGA GCTCGATCGT GGAGTTGAGC
CAGGCTCAAC TGGCGCAGAC CCAGGCTGCC ATTGGAAATG CCGACGCGCA GTATGAATAC
GAGAGCACGC TCGCGGCATT GCGGTACCAG ACCGGCAAAT AA
 
Protein sequence
MRMKALSSLL LLGSLSFGQT GQTNSTAPSS IKLTVADAEQ MALKNNPQIS IAKLLALAQR 
QVTREVRSNA MPTATLNVTA VDSHEGSRIT AGGLNNPVIY ERAAAGVNLS QLIYDFGRMH
NLVASAKYRE EAEVASQQAT TADITFAVDR AFYNALDAQS TLDVAKETVS ARQATADQIQ
ALTNAKLKSQ LDLSFANVNL AQAKLLLLDA ENRQAASFAN LNNLLGFEKQ QPYLLVDELA
TPPAPATNAE DLTAAAFQSR PDLIALNDRY QAAERFRRAE HDLNRPTISA LAAFGDTPVR
ADQLTPWYGA AGVNLSLPVF NGFLYSARAK QADFEAKAAQ EQVRDLRDRI ARDVQTTWLQ
STTSYQRMAV AQQLVQQANL ALDLAQTRYK LGLSSIVELS QAQLAQTQAA IGNADAQYEY
ESTLAALRYQ TGK