Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1698 |
Symbol | |
ID | 4070481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2058776 |
End bp | 2060077 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983706 |
Product | outer membrane efflux protein |
Protein accession | YP_590773 |
Protein GI | 94968725 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.572085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0641673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATGA AAGCCCTCTC GTCCCTACTA CTACTTGGTT CTCTTTCGTT CGGACAAACA GGTCAGACGA ATTCCACCGC ACCCTCGTCG ATAAAATTAA CGGTTGCGGA TGCGGAACAA ATGGCGCTGA AGAACAATCC GCAAATCTCA ATTGCGAAAT TGCTCGCACT GGCGCAACGC CAGGTCACAC GAGAGGTACG GTCGAACGCG ATGCCGACGG CAACCCTCAA CGTGACGGCC GTTGATTCGC ATGAGGGCAG CCGGATTACC GCAGGCGGGT TGAACAATCC AGTCATCTAC GAGCGTGCAG CGGCGGGTGT AAACCTAAGC CAGTTGATTT ACGACTTCGG ACGTATGCAC AACCTCGTCG CGAGCGCGAA ATATCGCGAG GAGGCGGAGG TCGCCTCCCA ACAGGCAACG ACCGCCGACA TAACTTTCGC AGTGGATCGC GCGTTCTACA ACGCGCTCGA TGCCCAGTCC ACGCTCGACG TAGCCAAAGA AACGGTGTCG GCACGCCAGG CAACGGCGGA CCAGATCCAG GCGCTCACGA ACGCGAAACT CAAATCGCAA CTTGACCTCA GTTTTGCAAA CGTTAATTTG GCGCAGGCAA AGCTTCTGCT GCTCGACGCC GAAAATCGGC AAGCAGCTTC TTTTGCCAAC CTCAACAATC TGCTGGGCTT TGAGAAGCAA CAGCCGTATC TGCTGGTTGA CGAACTTGCA ACCCCGCCCG CACCGGCGAC GAACGCGGAA GATCTCACTG CCGCGGCCTT TCAGTCCCGA CCGGATTTGA TCGCTCTTAA CGATCGTTAT CAGGCAGCGG AGCGTTTCCG CCGTGCGGAA CATGATTTGA ATCGCCCTAC CATCTCCGCG CTGGCGGCAT TCGGCGATAC TCCTGTCCGC GCCGATCAAC TCACGCCGTG GTATGGAGCA GCTGGGGTAA ACCTGAGCCT GCCGGTATTC AACGGATTTC TCTACTCGGC GCGCGCGAAG CAAGCCGATT TCGAAGCCAA AGCCGCGCAG GAGCAAGTCC GCGACTTGCG TGATCGCATC GCGAGGGATG TCCAGACCAC GTGGTTGCAG TCAACGACCT CGTACCAGCG CATGGCGGTG GCGCAACAGT TGGTGCAGCA GGCAAACCTT GCCTTAGACC TCGCGCAGAC TCGCTACAAG CTCGGACTGA GCTCGATCGT GGAGTTGAGC CAGGCTCAAC TGGCGCAGAC CCAGGCTGCC ATTGGAAATG CCGACGCGCA GTATGAATAC GAGAGCACGC TCGCGGCATT GCGGTACCAG ACCGGCAAAT AA
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Protein sequence | MRMKALSSLL LLGSLSFGQT GQTNSTAPSS IKLTVADAEQ MALKNNPQIS IAKLLALAQR QVTREVRSNA MPTATLNVTA VDSHEGSRIT AGGLNNPVIY ERAAAGVNLS QLIYDFGRMH NLVASAKYRE EAEVASQQAT TADITFAVDR AFYNALDAQS TLDVAKETVS ARQATADQIQ ALTNAKLKSQ LDLSFANVNL AQAKLLLLDA ENRQAASFAN LNNLLGFEKQ QPYLLVDELA TPPAPATNAE DLTAAAFQSR PDLIALNDRY QAAERFRRAE HDLNRPTISA LAAFGDTPVR ADQLTPWYGA AGVNLSLPVF NGFLYSARAK QADFEAKAAQ EQVRDLRDRI ARDVQTTWLQ STTSYQRMAV AQQLVQQANL ALDLAQTRYK LGLSSIVELS QAQLAQTQAA IGNADAQYEY ESTLAALRYQ TGK
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