| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1682 |
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| Symbol | |
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| ID | 4069350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2034560 |
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| End bp | 2037943 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637983690 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_590757 |
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| Protein GI | 94968709 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.592663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAAAGC CCATCGGCAT TTTTGCTGTT CTTGCGCTTA GTTGTTCGTT TGCTATTGCT
GCCGACCACA AACCCGATCC TGCCGAAGCG GCGCGATTGA ACAATATCGG CGTGGCGCTG
ATGAACCAGC AGCGCATGGA GAAAGCTGTC GAGAAGTTCG ATCTCGCATT GGAGAAGGAC
CCGAAGCTGT CGGTGGCATA TCTCGACAAA GGCATCGCGC TGCTGAATTT GCAGAAGCTG
CCGGAGTCCG AGGCCGCGCT GAACAAGGCG GGCGAGGCGA TGCCGAAGAA CCCGCGCGTC
TGGTACAACC TCGGGTTGCT GAATCGTGGG GCAGGGAAGT ACGACGCTGC GATCGAGAAC
TTCAATAGAG TTACGACGAT TGATCCCAAC GACTCCGACA CCTTCTACAT GATCGGCTCG
TTGTACCTGC AATTGCAGAA GTACGAGGAT GCAATCGGCG CTTATAAGAG TGCTCTGAAG
ATCAATCCGC TGCATGCGTC CGCTGAATTT GGGCTTGCGA AGGCCTTGCA GCGCGCAGGA
AAAGTAGAAG AGGCGCGCGA TCACCTGCAC ATCTTCGAGC ACCTGACCAA AGACAAGATC
TCCTCGCCGA TGACGTTGAT TTACGGCGAG CAGGGGCGTT ATTCGCTCGC GGAGGATGTG
CATACTGGTG CGCCGGAAGT GGGCGCGATG ATTCCGGTGA CGTTTGAAGC GCGGCCGTTG
CAAGGCGGGG CGCAAGCGGT TGCCGCGACG GCGGCCGACA CTGCCGGTCT GTGCATGATG
GACGTGAATG GCGACGGAAA ATTTGGCATA GTGGCGCTCG GCTCCGGTTC AAGTGCGATT
CGCGTTTTCC TGAATGACGG TAGCGGCAAG TTCAAAGAGG CGTCAGCCGC AGAGCATGGG
TTGAAAGCTG AAGGGACTGC GATCTCCTGC GCGGTTGGCG ATTTCGACAA CGACGGTCAT
CCGGATCTGG CGGTCGCGTT TACTGATCAA CTGCTGCTCT TCCGCAACCT AGGCAATGGC
AAGTTCGAGA ATGTTACGAA GGCTGCGGGA ATTTCGGCGT TGAACCATCC GGCTGGAATG
TCGTGGGTGG ATTACGACCA CGATGGCGAT CTCGATCTGT TCGTAACGGG TAGTGCAGTC
TCCGCGGGAA CCAACGTGCT CTGGCGCAAT AACGGTAACG GTACGTTTAC GGAAGTTGCT
GCCGAACGTG GCCTGCAGGG CATTGGCAGC ACAAAGTCCG TTGTGCTTAC CGATCTCAAT
AATGATCGTG CTGTGGATCT GCTCATCACT GGCGACACGG GTGCAACGGC GTATATCAAC
CCGCGCGAAG GCAAGTTCCA GACGTCCGCT CTCTATGAAG AGAAACTGCC GCCCGCGACC
GGCGCGTATG TATTCGACTT CAATAAAGAT GGGTGGATGG ATGTCGTGCT TACGCACGAC
GGCACCCCGG GAATTTCGCT CTGGAAGAAT TTGGATGGCA AGCACTTTGA GCGTGTAGCG
CTGCCAATTT CGGACGCGCA AGCTGCGTGG GGCGTGACCG CAATTGACGT GGACAACGAT
GGTTGGCTCG ACCTCGCTGC AGTCGTGCAG ACGGCGAAGG GGCCCGCGGT TCGGATCTTC
CGAAATACCG GATCAGCGGG GTTTGTCGAT GTGTCGAAGG CGATTGGTCT CGACAAACTT
CAGCTGCAGA ATCCGCGCGG AGTTGTTGCC GCCGATGTGG ACAGTGACGG TGCAGCCGAT
CTGATCGTTT CCCAAGGGAA TGCAGCACCG GTTGTGCTGC ACAACCACGG TGGGAGTGCG
AATCATTCTG TGCGAATTAC CCTCGCTGGT CTCGCCGACA ACAAGAGCGC GTTGGGAACG
AAGGTCGAAG TCTTTGCCGA CGGTCTTTGG CAAAAATGGG AGATCGTGGG CGGTTCAGGC
TACATGTCGC AAGGGCCGAA CGAGATTCTG GCTGGCATTG GCAAAAACAG CGCGGTCGAC
ATCGTGCGAA TGCTCTGGCC GGGCGGTGTG GTGCAGGACG AGACAGACAT CGCGATGGAT
AAGCCGGTCC ACTTCCTTGA GATCGATCGT CGCGGGAGTT CGTGTCCGAC GCTGTTTGCG
TGGAACGGCG AGAAGTATGA GTTTGTCTCC GACGTGATCG GTGCGGCAGT CATCGGCCAC
TGGATTTCGC CGACGGAGAA AAACCTCGCT GATCCCGACG AATGGGTGAA GGTGGAAGGT
TCGCAGTTGC GCGCGCGCAA CGGCAAGCTG AGCTTGCGCT TCGGCGAACC GATGGAAGAA
GTGAACTTCG TTGACCAGGT GCGGCTCGTG GCCGTCGATC ATCCCGCAAA TGCTGATGTT
TATCCCGACG AGCGCTTCCT GAGCGCGCCG CCGTTCGCGA GTGGCAAGGT CTTTGTGACT
GGTAGGCCAC ATCCGCCTGT GGGGGCGTGG GATGACGCGG GGAACGATGT GCTCGATCTC
GTGCGCGAGA ACGATCATCA GTACGTTCGC GACTTCCGCA ATCTTACGTA CGCTGGTTAT
GCCAAGCAGC ACGCATTAAC GCTTGATCTC GGTGAATGGA GTCCGAACGC GCCGTTGCGG
CTGTTCCTGC AAGGCTTTAT CGAGTACTTC ACCGCAAATT CGATGTACGC GGCTTGGCAG
GCGGGAATCA ACCCGGTTGC GCCTTATATT GAGGCGCAGA TGCCGGATGG TTCATGGAAG
CGAGTTGTGG ATGACATGGG TTTCCCGGCT GGATTGACGC GCATGATCAC TGTAGACCTG
ACCGGCAAGT TGCCGGCGAA CACGCGCAAG ATTCGTATCG TGACCAATCT TCAGATTTAT
TGGGACCAGG TGCTGGTGGA CAACGCGGCT CCGGCGGCGA AGACCCGCGT AACCGAATTG
CCGCTGTTGT CGTCGGACCT CCAGTTCCGC GGCTATCCAC AGCAGGTCGA CGGCGAAACT
CCGGGTGATC TGACTTACAT CTACGAAAAG GCCAGTAAGA CCGGGCCCTT CACCCGTGAG
CGCGGGAACT ACACGCATTA CGGCGACGTG ACCGAACTGC TGAAGCAAGT GGACGACCAT
TACGTGATCT TTGGCAGCGG GGAAGATATG GACCTTGAGT TCGATCCCGC CGCCTTGCCT
AAGCTGCCTG CAGGATGGAA GCGCGACTAT TTCTTCTACG CGAATGGCTT CGTGAAGGAC
ATGGACTTCT ACGAGGCGAC GCCATTCACG GTGGCAGACT TGCCATTCCA CAGGATGTCG
GCATATCCGT ATCCGGTGGG CGAGCATTAT CCGGATGATC TTGACTCGGT GCGTTACCGG
CTGGAATGGG ACGATCGTTT TGACTCTGGC ACAAACGGAG CTGGGAACCA CTTTGGCTTC
GATTATGAAA ATCGCCGTCA ATAG
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| Protein sequence | MRKPIGIFAV LALSCSFAIA ADHKPDPAEA ARLNNIGVAL MNQQRMEKAV EKFDLALEKD
PKLSVAYLDK GIALLNLQKL PESEAALNKA GEAMPKNPRV WYNLGLLNRG AGKYDAAIEN
FNRVTTIDPN DSDTFYMIGS LYLQLQKYED AIGAYKSALK INPLHASAEF GLAKALQRAG
KVEEARDHLH IFEHLTKDKI SSPMTLIYGE QGRYSLAEDV HTGAPEVGAM IPVTFEARPL
QGGAQAVAAT AADTAGLCMM DVNGDGKFGI VALGSGSSAI RVFLNDGSGK FKEASAAEHG
LKAEGTAISC AVGDFDNDGH PDLAVAFTDQ LLLFRNLGNG KFENVTKAAG ISALNHPAGM
SWVDYDHDGD LDLFVTGSAV SAGTNVLWRN NGNGTFTEVA AERGLQGIGS TKSVVLTDLN
NDRAVDLLIT GDTGATAYIN PREGKFQTSA LYEEKLPPAT GAYVFDFNKD GWMDVVLTHD
GTPGISLWKN LDGKHFERVA LPISDAQAAW GVTAIDVDND GWLDLAAVVQ TAKGPAVRIF
RNTGSAGFVD VSKAIGLDKL QLQNPRGVVA ADVDSDGAAD LIVSQGNAAP VVLHNHGGSA
NHSVRITLAG LADNKSALGT KVEVFADGLW QKWEIVGGSG YMSQGPNEIL AGIGKNSAVD
IVRMLWPGGV VQDETDIAMD KPVHFLEIDR RGSSCPTLFA WNGEKYEFVS DVIGAAVIGH
WISPTEKNLA DPDEWVKVEG SQLRARNGKL SLRFGEPMEE VNFVDQVRLV AVDHPANADV
YPDERFLSAP PFASGKVFVT GRPHPPVGAW DDAGNDVLDL VRENDHQYVR DFRNLTYAGY
AKQHALTLDL GEWSPNAPLR LFLQGFIEYF TANSMYAAWQ AGINPVAPYI EAQMPDGSWK
RVVDDMGFPA GLTRMITVDL TGKLPANTRK IRIVTNLQIY WDQVLVDNAA PAAKTRVTEL
PLLSSDLQFR GYPQQVDGET PGDLTYIYEK ASKTGPFTRE RGNYTHYGDV TELLKQVDDH
YVIFGSGEDM DLEFDPAALP KLPAGWKRDY FFYANGFVKD MDFYEATPFT VADLPFHRMS
AYPYPVGEHY PDDLDSVRYR LEWDDRFDSG TNGAGNHFGF DYENRRQ
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