| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1670 |
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| Symbol | |
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| ID | 4069338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2020859 |
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| End bp | 2021455 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637983678 |
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| Product | SSU ribosomal protein S30P / sigma 54 modulation protein |
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| Protein accession | YP_590745 |
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| Protein GI | 94968697 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGTAG AAGTCATTGG CAGACAGTAC AACATCACTC CCGCCGTTCG TAAGGAGGTG
GAATCGGGCC TCGAAAAGCT CACCAAGATT TTGGGTGAGA GTTTCAAAAG CAAGGTCATT
CTTTCGGTCG AGAAACATCG CAACCTCGCG GAAATTACGA TCAAGCGCCG CGCCCAGGAT
CTGGTGGGGC TGGGGGAGTC CACCGACATG CGGACGGCGA TCGGCGAAGC GTTGGAGCAT
ATTGAGAAGC AGGCACTGAA ACACAACAAT CGCCGGAGGA ACATTAAGCG CAAGGGCAAA
GCGGATTGGA AGGAGACGTC GGAGGGCGAG CAGGCGCTGA CTATCGCCGT GGGATCGACG
GCGACAACCG CGGTGCCGGT GATGGTGCAC AAGTTTCCGT CGGTTACACG GACGACGGAG
GCACACCTTA CGCGCTCGCA GGACGCTGTC GCGCTGCGGC CGATGACCGT GGAAGAAGCG
GTGAAGGAAT GTGAATTCCG CGATCGCGAA GTGTTTGTGT TTCGCGATAA AAAGGGAAGA
GTGAATGTTC TGCATCGTCG GAAAGACGGG AAGATGGAAT TGATTGAAGC TCCTTAA
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| Protein sequence | MNVEVIGRQY NITPAVRKEV ESGLEKLTKI LGESFKSKVI LSVEKHRNLA EITIKRRAQD
LVGLGESTDM RTAIGEALEH IEKQALKHNN RRRNIKRKGK ADWKETSEGE QALTIAVGST
ATTAVPVMVH KFPSVTRTTE AHLTRSQDAV ALRPMTVEEA VKECEFRDRE VFVFRDKKGR
VNVLHRRKDG KMELIEAP
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