Gene Acid345_1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1653 
Symbol 
ID4069801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2001134 
End bp2001424 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content56% 
IMG OID637983662 
Productflagellar hook-basal body complex protein (FliE) 
Protein accessionYP_590729 
Protein GI94968681 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.117706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAACG GTATCCCTGT CGGCGGTTCG GCTGTAGGTC AAGCGTGGTC GTCTGAGGCG 
CAGGGCAAGA GCAGTGGGTT TCTCGACAGC CTCAAGTCTG CGATTTCGGA CGTGGAGGAT
CAGCACACGG ACGCCCAGAC AAAGCTGGCA AATCTGCTGA CTGGCAAGGG CGAAGATGTC
CATTCTGCGG CAATTGCTAT CGAAAAAGCG TCTCTCTCTT TCGAGTTGAT GATGCAGCTG
AGAAACAAAG CGGTGGCGGC GTACCAGGAA GTCGCCCGGA TGCAGTTCTG A
 
Protein sequence
MLNGIPVGGS AVGQAWSSEA QGKSSGFLDS LKSAISDVED QHTDAQTKLA NLLTGKGEDV 
HSAAIAIEKA SLSFELMMQL RNKAVAAYQE VARMQF