Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1642 |
Symbol | fliP |
ID | 4072529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1990784 |
End bp | 1991518 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637983651 |
Product | flagellar biosynthesis protein FliP |
Protein accession | YP_590718 |
Protein GI | 94968670 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTGCA TTCGCAACCC TCGGAGTTGG ATTGCTTGTT TCGGCATGCT CTCCATTAGC CGACCCGCTT TGGGAGCGGA CCACGGAGTC AATCTTCCGG CGATCGGTAA CAACGCGACT CCCTGGACGA TCGTTGTTCT GTTAACGGCA GTGACGCTTT TGCCTGCGGT GCTGCTTTGC ATGACGCCAT TCGTTCGGCT GTTGGTTGTG TTCCATTTCC TCCGGCAGGC CCTTGGCACG CAGACGGCAC CGACCAATCA AACACTGGTC GGGCTGACCT TGATTCTGAC TTTGTTTCTG ATGCAACCGG TGATCACGCA CATTCAGCAA GATGCGCTTA CCCCAATGCA GCAAGGCAAG ATTTCCGTCA CTGAGGCGAT CAGTCGCGGA GCGGAGCCGG TTCGCCAGTT CATGCTGCGG TTTTCGAGAG AAAAAGACCT GGCGTTGTTT GTTGAGCTGG CAAAGCTCCC ACCGCCGAAA ACGTCACAAG ACCTGCCGTT TCGTGTCGTA GCTCCGGCCT ACATCCTCTC TGAGTTGAAA GCTGGCTTTC AGATTGGAGC AGTCCTCTTC CTTCCCTTCC TCGTGATCGA TCTTGTGATC GCTGCGATCA CTACGTCGGT AGGCATGATG CAGCTTCCCC CCGTCGTTAT CTCTACTCCA GTCAAGATCC TGCTGTTTGT GATGGTGGAC GGCTGGAACT TACTGATCGC CTCGCTCATG AAGAGCTTCG GATAG
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Protein sequence | MNCIRNPRSW IACFGMLSIS RPALGADHGV NLPAIGNNAT PWTIVVLLTA VTLLPAVLLC MTPFVRLLVV FHFLRQALGT QTAPTNQTLV GLTLILTLFL MQPVITHIQQ DALTPMQQGK ISVTEAISRG AEPVRQFMLR FSREKDLALF VELAKLPPPK TSQDLPFRVV APAYILSELK AGFQIGAVLF LPFLVIDLVI AAITTSVGMM QLPPVVISTP VKILLFVMVD GWNLLIASLM KSFG
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