Gene Acid345_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1642 
SymbolfliP 
ID4072529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1990784 
End bp1991518 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID637983651 
Productflagellar biosynthesis protein FliP 
Protein accessionYP_590718 
Protein GI94968670 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGCA TTCGCAACCC TCGGAGTTGG ATTGCTTGTT TCGGCATGCT CTCCATTAGC 
CGACCCGCTT TGGGAGCGGA CCACGGAGTC AATCTTCCGG CGATCGGTAA CAACGCGACT
CCCTGGACGA TCGTTGTTCT GTTAACGGCA GTGACGCTTT TGCCTGCGGT GCTGCTTTGC
ATGACGCCAT TCGTTCGGCT GTTGGTTGTG TTCCATTTCC TCCGGCAGGC CCTTGGCACG
CAGACGGCAC CGACCAATCA AACACTGGTC GGGCTGACCT TGATTCTGAC TTTGTTTCTG
ATGCAACCGG TGATCACGCA CATTCAGCAA GATGCGCTTA CCCCAATGCA GCAAGGCAAG
ATTTCCGTCA CTGAGGCGAT CAGTCGCGGA GCGGAGCCGG TTCGCCAGTT CATGCTGCGG
TTTTCGAGAG AAAAAGACCT GGCGTTGTTT GTTGAGCTGG CAAAGCTCCC ACCGCCGAAA
ACGTCACAAG ACCTGCCGTT TCGTGTCGTA GCTCCGGCCT ACATCCTCTC TGAGTTGAAA
GCTGGCTTTC AGATTGGAGC AGTCCTCTTC CTTCCCTTCC TCGTGATCGA TCTTGTGATC
GCTGCGATCA CTACGTCGGT AGGCATGATG CAGCTTCCCC CCGTCGTTAT CTCTACTCCA
GTCAAGATCC TGCTGTTTGT GATGGTGGAC GGCTGGAACT TACTGATCGC CTCGCTCATG
AAGAGCTTCG GATAG
 
Protein sequence
MNCIRNPRSW IACFGMLSIS RPALGADHGV NLPAIGNNAT PWTIVVLLTA VTLLPAVLLC 
MTPFVRLLVV FHFLRQALGT QTAPTNQTLV GLTLILTLFL MQPVITHIQQ DALTPMQQGK
ISVTEAISRG AEPVRQFMLR FSREKDLALF VELAKLPPPK TSQDLPFRVV APAYILSELK
AGFQIGAVLF LPFLVIDLVI AAITTSVGMM QLPPVVISTP VKILLFVMVD GWNLLIASLM
KSFG