Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1638 |
Symbol | |
ID | 4072525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1986592 |
End bp | 1988670 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637983647 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_590714 |
Protein GI | 94968666 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.885636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAGA AGTCGTCTAT TCGGAAATTT CTCGGCGGGA ACGCAGTGGA CTGGATCATC CCGATCGCTG CCGTCAGCGT GGTGTTCGTG ATGCTGGTGC CGATGCCTTC TTTGTTGCTC GACCTGTTGC TTGCCATTAG CATCACCATT TCCGTTCTCG TACTGCTCTC GGCAGTTCAC ATTTTGCGGC CGGTGCAATT CTCGGTCTTT CCTTCTCTAC TGTTGCTGCT GACGTTGTTT CGGCTCTCGC TAAATCTCGC CAGCAGCCGC CGAATCCTCC TTCACGGCAA TGAAGGATCT GCGGCCGCGG GCAATGTGAT CGAAGCTTTC GGCCAATTTG TTGTTGGTGG TAATTATGTC GTGGGTTTCG TGTTGTTTCT CGCGTTGATT GCCATTCAAT ACATGGTGGT GAGTCACGGC GCAGTTCGTA CGGCGGAAGT TACGGCACGC TTCACTCTCG ATGCGTTGCC TGGCAAGCAG ATGGCTATCG ACGCCGACTT GAACGCCGGC ATCATTGATG AAACGCAGGC CAAGAAACGG CGCGAACAGG TGGCGCGCGA AGCCGAGTTC TACGGCGCCA TGGACGGCGC CGCCCGTTTC AACCAGCGGG ACTCGCTTGC GACGGTCCTT ATCACGGCGA TCAACATCGT CGCCGGCCTG CTCATCGGCA TATTCCAGCT GGATATTCCA CTGCGTGAAG CGGTGAAGAC ATACACCATC CTCACGGTGG GAGATGGCCT GGTCACCATG ATTCCGTCGC TCTTAGTTTC TGTTGCGGGA GGCATGGTAG TAACACGAGC TTCTTCCGAC GACAGCCTTG GCGGAGACCT CCGTCGGCAA CTCTTCGCGC GCAGTCGGCC GTTGTGGATC GCCAGCGGCG TGATGTTGGC GTTGGCCTTG GTTCCTGGAC TTCCCAAGGG ATCGTTTTTC CTGCTCGCGG GCGGAGTCGG ATTTCTGGCG TGGCGCGCAC AAAAGAATGA GACCGTTTCG GCGGCTGCGG AGAGTGCCGC GACGAACAAG CCGGGATCGG CGGTTGCGGC CGGCACTGAA CCGCTTGATG CAGTCCTGAA GCTTGATGAT CTCAGCCTGG AAGTGGGACT CGGGCTTGTG CCCCTGGTCG ATAACCGTCA AGGTGGACAG CTTCTTTCAA GAGTGCGGGC AGTGCGCAAG AACCTGGCGC AGCATCTTGG GTTCGTCGTG CCGTCGGTGC ATATAACCGA TAACCTCAAG TTGCGTCATC GTGAGTATGT GATCCTGCTG CGCGGCGTGG AGATTGCGCG CTGGGAGATG AACGAAGATC GATTGCTGGC AATCAGCTCC GACCGCGATG TACCGGACAT TCCCGGTGTA GCAACAAAAG AACCAGCGTT TGGCGTCCAT GCGAAATGGA TAGCGGCATC GTTGCAGGAG AAGGCGCTGG CATCCGGATA TGCGGTTGTC GATCAGACAT CGGTCCTTGC GACCCATCTT GGCGAAACTA TCAAGCAACA CGCCTATGAG TTGCTTTCCC GCTCGGAGAC AAAGCGGCTT CTTGATCGGT TGACCGAAAG CCATCCCAAG CTAACCGAAG AACTCGTGCC GAAGTTGCTT AGCCTGGGTG AAGTGCAGAA GGTGTTGCAG CAATTGCTGC GGGAGCAGGT TTCAATTCGG GACCTCGCAA CCATTTTGGA GACGCTCATT GATCTGGCGC CGGCAACGAA AAATACGGTG CTGCTTGTGG AATCAGCGCG ACAGGCGCTC GGACGGGCCC TGGTGCGTCC ACTGCTGGGA ATTGATGGTG GATTAAAGGT GGTGACAGTG GAATCGAAGG TGGAGGAGGA ATTGACGAAG ATCTTCCACC CGCAAGCGGG GTTGGTTCCG GATCCGCTTG AACCCAACTT CGTTCGCCGG TTCCTCGAAT CTTTGAATTC TCTTATCGGC GGACACGCCA AGTTGGCAAC ACCCGTGCTG CTTTGTACAT CGCCGGCGCG CTTCCACCTT CGACGACTGC TGGAGCCGTT TCTGCCAAAG ATCGTGGTGT TGTCGCCTGG CGAGATTCCA CCCGTTGTGC CGGTACAAAG CATAGGGGTG GTGCGATGA
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Protein sequence | MKEKSSIRKF LGGNAVDWII PIAAVSVVFV MLVPMPSLLL DLLLAISITI SVLVLLSAVH ILRPVQFSVF PSLLLLLTLF RLSLNLASSR RILLHGNEGS AAAGNVIEAF GQFVVGGNYV VGFVLFLALI AIQYMVVSHG AVRTAEVTAR FTLDALPGKQ MAIDADLNAG IIDETQAKKR REQVAREAEF YGAMDGAARF NQRDSLATVL ITAINIVAGL LIGIFQLDIP LREAVKTYTI LTVGDGLVTM IPSLLVSVAG GMVVTRASSD DSLGGDLRRQ LFARSRPLWI ASGVMLALAL VPGLPKGSFF LLAGGVGFLA WRAQKNETVS AAAESAATNK PGSAVAAGTE PLDAVLKLDD LSLEVGLGLV PLVDNRQGGQ LLSRVRAVRK NLAQHLGFVV PSVHITDNLK LRHREYVILL RGVEIARWEM NEDRLLAISS DRDVPDIPGV ATKEPAFGVH AKWIAASLQE KALASGYAVV DQTSVLATHL GETIKQHAYE LLSRSETKRL LDRLTESHPK LTEELVPKLL SLGEVQKVLQ QLLREQVSIR DLATILETLI DLAPATKNTV LLVESARQAL GRALVRPLLG IDGGLKVVTV ESKVEEELTK IFHPQAGLVP DPLEPNFVRR FLESLNSLIG GHAKLATPVL LCTSPARFHL RRLLEPFLPK IVVLSPGEIP PVVPVQSIGV VR
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