Gene Acid345_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1620 
Symbol 
ID4072546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1964226 
End bp1964951 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content58% 
IMG OID637983629 
ProductABC transporter, ATPase subunit 
Protein accessionYP_590696 
Protein GI94968648 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACGGG TTGACGGCAA CGGCAGTGAT AGCCTGATTA AGGTCCGGGA TCTCGACAAA 
ACCTACAAGC GTGGCGGCGA AGACGTCCAC GTGCTCCAGG GCCTGAAGCT CGACATCAGC
AAAGGCGAGT TCGTCGCCTT CATGGGCCCC AGCGGTTCCG GCAAAACCAC GCTCCTCAAC
TTGCTTGGCG GACTTGACCT ACCGACTCGT GGCACGATTA ATGTCGCTGG CGACGAAGTC
TCGCGCATGT CTGGCTCGAA GCTTACCCAC TGGCGCGCCC GCCACGTCGG GTTCGTCTTC
CAGATGTACA ACCTCATCCC TGTACTTACA GCATTCCAAA ACGTTGAACT GCCGCTGCTG
TTAACTAAGC TATCGTCATC ACAGCGCAAG AAGCACGTTG AGACCGCCAT GGCGCTCGTT
GGTCTTGAGC ACCGCATGCA TCACTATCCA AGGCAACTCT CCGGCGGACA GGAGCAGCGT
GTCGGCATTG CTCGTGCCAT CGTCGCCGAC CCAACGTTCC TGCTCTGCGA CGAGCCTACC
GGCGACCTCG ACCGCAAATC GGCTGACGAA ATCCTCACGC TGCTGGAACA GCTCAACCGT
GAACACGGAA AAACGATCCT GATGGTTACG CACGACCCAC TAGCGGCCGA GCGTGCCCAT
TCCCTCCTTC ACATGGATAA AGGCGTTCTC GTTGAAGCCG AGAAGGCCCG CGTAGGAGAA
GTGTAA
 
Protein sequence
MVRVDGNGSD SLIKVRDLDK TYKRGGEDVH VLQGLKLDIS KGEFVAFMGP SGSGKTTLLN 
LLGGLDLPTR GTINVAGDEV SRMSGSKLTH WRARHVGFVF QMYNLIPVLT AFQNVELPLL
LTKLSSSQRK KHVETAMALV GLEHRMHHYP RQLSGGQEQR VGIARAIVAD PTFLLCDEPT
GDLDRKSADE ILTLLEQLNR EHGKTILMVT HDPLAAERAH SLLHMDKGVL VEAEKARVGE
V