Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1620 |
Symbol | |
ID | 4072546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1964226 |
End bp | 1964951 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983629 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_590696 |
Protein GI | 94968648 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACGGG TTGACGGCAA CGGCAGTGAT AGCCTGATTA AGGTCCGGGA TCTCGACAAA ACCTACAAGC GTGGCGGCGA AGACGTCCAC GTGCTCCAGG GCCTGAAGCT CGACATCAGC AAAGGCGAGT TCGTCGCCTT CATGGGCCCC AGCGGTTCCG GCAAAACCAC GCTCCTCAAC TTGCTTGGCG GACTTGACCT ACCGACTCGT GGCACGATTA ATGTCGCTGG CGACGAAGTC TCGCGCATGT CTGGCTCGAA GCTTACCCAC TGGCGCGCCC GCCACGTCGG GTTCGTCTTC CAGATGTACA ACCTCATCCC TGTACTTACA GCATTCCAAA ACGTTGAACT GCCGCTGCTG TTAACTAAGC TATCGTCATC ACAGCGCAAG AAGCACGTTG AGACCGCCAT GGCGCTCGTT GGTCTTGAGC ACCGCATGCA TCACTATCCA AGGCAACTCT CCGGCGGACA GGAGCAGCGT GTCGGCATTG CTCGTGCCAT CGTCGCCGAC CCAACGTTCC TGCTCTGCGA CGAGCCTACC GGCGACCTCG ACCGCAAATC GGCTGACGAA ATCCTCACGC TGCTGGAACA GCTCAACCGT GAACACGGAA AAACGATCCT GATGGTTACG CACGACCCAC TAGCGGCCGA GCGTGCCCAT TCCCTCCTTC ACATGGATAA AGGCGTTCTC GTTGAAGCCG AGAAGGCCCG CGTAGGAGAA GTGTAA
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Protein sequence | MVRVDGNGSD SLIKVRDLDK TYKRGGEDVH VLQGLKLDIS KGEFVAFMGP SGSGKTTLLN LLGGLDLPTR GTINVAGDEV SRMSGSKLTH WRARHVGFVF QMYNLIPVLT AFQNVELPLL LTKLSSSQRK KHVETAMALV GLEHRMHHYP RQLSGGQEQR VGIARAIVAD PTFLLCDEPT GDLDRKSADE ILTLLEQLNR EHGKTILMVT HDPLAAERAH SLLHMDKGVL VEAEKARVGE V
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