| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1590 |
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| Symbol | |
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| ID | 4069028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1937635 |
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| End bp | 1938978 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637983599 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_590666 |
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| Protein GI | 94968618 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.632481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTTG TTGCCAATCC GACGTTCTTC AAGTTCTTCA TGATGCTCCT GGGGAGCGTT
GTGATCATCG CCGTCGGAGC CCTGGCGTTT CGCTATCTCA AGCAAATGAT GCTGCAGGAC
GTAGATATGA GCAGCCGGCC TGCCGGTCGC GAAAGCAGCG GGTTCGCCTT CCACACCTAC
CAGGGCGTCA TCTCCAGACT CAAAGAGCAG GAGCAGGAAC TCAAGAGCCT GCGCGAAGCG
GCCAGCAGCC GTGCATCGGC CTCCGAGAGC CTGAGCGTGG CAGTGCTGAC CAACCTCGGC
AGCGGAGTCG TCGTATTCAA TCCGGCAGGC ATTGTGCAGC AGGCGAATCC CGCAGCGCGC
GAGATCCTCG GGTACGCATC ACCCACCGGT CTTCACACGC GCGACCTGAT GAAAGGAGTG
CATGCAGTGC GCACCGAAAC CGGCCAGACC GCAGTCGAGG TGTCGTCGTT CCTGCGCGCC
ATTACCGACG CACCGCAGCA CAACCAGACC ACGAGGTTTG AGGTGGACTA CCGCACGCCG
GGTGGCGTGG AGAAGGTGCT CGCGATTACC GTCTCGCCAA TCCGATCGAG TGTCGGCGCT
TTTCTTGGCT CGACTTGTTT GATCACCGAT CGCACCCAGA TCAGCAGCCT GGCGCGACAG
ATGCGCGTGC GCGAGAACCT TGCGTCGCTG GGCGAGATGT CGGCCGGTAT TGCGCATGAG
TTCAAGAATT CGTTGGCGAC AATCTCTGGC TACGCACAGA TGCTCAAAGG CGAGCCCGAT
GAAACCGTCA GCGAGTTTGC AACCCGCATC CAGGGCACGA CTGAGAACCT TACCAGCGTG
GTAACAGACT TCCTGAATTT CGCACGGCCG CAACAGCTCA AGCGCGAACC GATCGAACTG
CGCCCAGTGC TGGAAGACTG CGCGCGAGAG ACGAAGGTCA CGCTGGAGTT CCAGAACTTT
CCTGACCGGC TCGTTGTGAA TGGCGACCGC ACGGCGCTGC GGCAGGTCTT CAGTAATCTC
TTGCGAAATG CCGCCGAAGC AGCACGGAAC AACACTCCGG TCCGCGTCAC GGTACGAGCA
TCGGCGACCG ACACAAGCGT GGAGTTAAGT CTCCACGACA ACGGAACGGG CATTCCGGAA
GAGGCCCTGA AGAACATCTT CATCCCCTTC TTCACCACCA AGCCACAGGG AACAGGGCTG
GGCTTAGCGC TGGTACATCG GATCGTGACC GAACACGGGG GTTCCATTCG CGCGGGCAAC
GACCTCGAAG GTGCGGTATT CACCTTAAGT CTGCCTTTAC AAAAACCTGC AGCAGAAAAG
CCCGCCACCG CAAACCCAAA GTAA
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| Protein sequence | MNLVANPTFF KFFMMLLGSV VIIAVGALAF RYLKQMMLQD VDMSSRPAGR ESSGFAFHTY
QGVISRLKEQ EQELKSLREA ASSRASASES LSVAVLTNLG SGVVVFNPAG IVQQANPAAR
EILGYASPTG LHTRDLMKGV HAVRTETGQT AVEVSSFLRA ITDAPQHNQT TRFEVDYRTP
GGVEKVLAIT VSPIRSSVGA FLGSTCLITD RTQISSLARQ MRVRENLASL GEMSAGIAHE
FKNSLATISG YAQMLKGEPD ETVSEFATRI QGTTENLTSV VTDFLNFARP QQLKREPIEL
RPVLEDCARE TKVTLEFQNF PDRLVVNGDR TALRQVFSNL LRNAAEAARN NTPVRVTVRA
SATDTSVELS LHDNGTGIPE EALKNIFIPF FTTKPQGTGL GLALVHRIVT EHGGSIRAGN
DLEGAVFTLS LPLQKPAAEK PATANPK
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