Gene Acid345_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1578 
Symbol 
ID4069016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand+ 
Start bp1928078 
End bp1928614 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content55% 
IMG OID637983587 
Producthypothetical protein 
Protein accessionYP_590654 
Protein GI94968606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.488322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.0994287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTC GTGAGATTCG CCGGGTAATG AATGTCGTCC TCGGTGCGTT GCTATTGGTG 
ATCCTGGTGT GCGTCGGCAT ACTGCTCTCA CCGCTGGCGA AATCCCGGTC GCAGCGTGAA 
GCCGATTTGC AGGAAATGCA GGCGCAGTTC AAGGACAAAG AGCGCGAACT CGGCCCGTCG 
CACGGGATCG ACAATAAGAT CGGCGCAGCG GCAGTCGATA TCGGGAGCTT CTACAAGGAC 
CGCCTCCCGG CGCAGTACTC GCAGATTGAC ACCGCCCTGG TGAAGGCTGG CCAGGATTCC 
GGAGTGCAAC TGCAAGGCAT CTCATTTAAG GCCGAGAAGA AGATGGTGGA CGACCTGCAG 
AGGGTCGATA TTCTTTTGAC CATCTCCGGG CCGTATGTGA ACGATGTAAA GTTCATCAAC 
GCGGTGGAAC GTAACAAGGT ATTTTTCGTG ATCAGCAGCG TCCAATTAGG TGGCAGCAGC 
AATGGCGTCC AGTTGCAGGT AAAGGCCGAG ACCTATTTGA AGACGGGAGC GGCATAA
 
Protein sequence
MTVREIRRVM NVVLGALLLV ILVCVGILLS PLAKSRSQRE ADLQEMQAQF KDKERELGPS 
HGIDNKIGAA AVDIGSFYKD RLPAQYSQID TALVKAGQDS GVQLQGISFK AEKKMVDDLQ 
RVDILLTISG PYVNDVKFIN AVERNKVFFV ISSVQLGGSS NGVQLQVKAE TYLKTGAA