| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1575 |
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| Symbol | |
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| ID | 4069013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1923577 |
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| End bp | 1924788 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983584 |
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| Product | type II secretion system protein |
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| Protein accession | YP_590651 |
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| Protein GI | 94968603 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.377421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0567328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAT ACGTCGTAAA GCTGGCCGAC GAACGCGGCC GCATCCAGGA AAAAACCGAG
AGCGCACACT CCGAGGCCGA GATCCGGGAC CGCTTTTCGC AGGCCGGATA CCTGGTGTAC
TCGGTCAAGG CGAGGGGTAC AGCCGTTGGC ATCCGCCTGC CGTTCCGCCG CAAGGTGAGC
GCGCAACAGT TCCTAATCTT CAACCAGCAA TTCCTGACAT TAGTTCGCGC CGGACTGCCG
ATTGTGCAGT CGATGGAACT CCTGATGCGC CGGCAGAAGA ACCAGTACTT TCAAAAGGTT
CTTGAAGACG TTCGGGATCG GCTGAAGGGC GGCTCGTTGT TGTCGGAGGC GTTCGAGGCG
CAGGGAATTT TCCCGAAGAT CTATACGACG ACTCTGCTCG CCGGCGAGAA GAGCGGCAAC
CTCGAAGAAG TAGTTGGCCG TTACATTGCG TTCCAGCGTC TACTGCTTTC ATTCCGTAAG
AAGCTGATTG CATCGCTGAT CTATCCATCC ATTCTCGTCT GCGGCGTGGT GGTGCTGTTC
TCCATGCTGA TTACGTGGGT GGTTCCTCGA TTCGCATTGT TATTCCAGGA TTTAGGTTCG
GACTTGCCGG CGATCACGAA GTTCGTTCTG GCGTTTGGTA ATAACGCGCA GACTTGGGCA
CCGTTCGTCC TGGTCGGCGC AATTGTGTTG GCGATCGTTT TTTTTCGTTG GAAGAAAACC
GAGTCCGGTT CGCTGATGTG GGACCGGTTC ATGATGTCGC TACCGATTTT CGGACAGATT
TGGCTGAAGT CGCAGGTGTC GACATTCTCG CGCATGTTGT CCACGTTGCT CGGCGGCGGC
CTGCCGTTAG TGCCGTCGTT AGAGACGGCG GCGGCTTCGA TTGGAAGCAA AACTTTGGCC
CGGGGGATTC GTACGGCGAG CAAGAGCGTG CGTGAGGGCA GATCGCTGGC CCGGAGCCTG
GAAGCGACGG CAGCGTTTCC GGATTTGTCG GTAGAGATGA TTGAAGTGGG CGAGTCCACG
GGCGCGTTGC CGCAAATGCT GGTGTCGGTG GCGGAGTTCT ACGAAGAAGA CGTGCAGAAC
GCGCTGGCGG CGGCGATGTC GCTGGTGGAG CCGGTAATCC TGATCATCAT GGGCATGGTC
GTGGGGTTCA TCCTGATAGC ACTCTATCTG CCGATTTTCA GCATCGGAAT GGGCGGGGCT
GCGGGACACT AG
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| Protein sequence | MAEYVVKLAD ERGRIQEKTE SAHSEAEIRD RFSQAGYLVY SVKARGTAVG IRLPFRRKVS
AQQFLIFNQQ FLTLVRAGLP IVQSMELLMR RQKNQYFQKV LEDVRDRLKG GSLLSEAFEA
QGIFPKIYTT TLLAGEKSGN LEEVVGRYIA FQRLLLSFRK KLIASLIYPS ILVCGVVVLF
SMLITWVVPR FALLFQDLGS DLPAITKFVL AFGNNAQTWA PFVLVGAIVL AIVFFRWKKT
ESGSLMWDRF MMSLPIFGQI WLKSQVSTFS RMLSTLLGGG LPLVPSLETA AASIGSKTLA
RGIRTASKSV REGRSLARSL EATAAFPDLS VEMIEVGEST GALPQMLVSV AEFYEEDVQN
ALAAAMSLVE PVILIIMGMV VGFILIALYL PIFSIGMGGA AGH
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